RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ENGASEQ8NFI3 743 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ZMAT2Q96NC0 199 aaKnown RBP16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ACAP3Q96P50 834 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 PAAF1Q9BRP4 392 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 TLR9Q9NR96 1032 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 FAN1Q9Y2M0 1017 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ANK1P16157 1881 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 SMIM28A0A1B0GU29 152 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 FSCN2O14926 492 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 OGTO15294 1046 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
SCN1B-204ENST00000596348 THP07101 528 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 CXCL8P10145 99 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 OR1G1P47890 313 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 YARSP54577 528 aaKnown RBP16.36■□□□□ 0.21
SCN1B-204ENST00000596348 TUSC3Q13454 348 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
SCN1B-204ENST00000596348 ADGRD2Q7Z7M1 963 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 TMEM169Q96HH4 297 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 MSTO1Q9BUK6 570 aa16.36■□□□□ 0.21
SCN1B-204ENST00000596348 NSUN3Q9H649 340 aaKnown RBP16.36■□□□□ 0.21
SCN1B-204ENST00000596348 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
SCN1B-204ENST00000596348 NCOR1O75376 2440 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 CASTOR2A6NHX0 329 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 EFEMP2O95967 443 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 ALDH2P05091 517 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 CLTAP09496 248 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 KCNE1P15382 129 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 KRT17Q04695 432 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 SOX4Q06945 474 aaPredicted RBP16.35■□□□□ 0.21
SCN1B-204ENST00000596348 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
SCN1B-204ENST00000596348 DDX53Q86TM3 631 aaKnown RBP16.35■□□□□ 0.21
SCN1B-204ENST00000596348 TMEM87AQ8NBN3 555 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 SLC39A2Q9NP94 309 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 CNTN3Q9P232 1028 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 VCANP13611 3396 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
SCN1B-204ENST00000596348 TTC26A0AVF1 554 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 MYL1P05976 194 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 IGFBP6P24592 240 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 FAM160A1Q05DH4 1040 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 HYAL1Q12794 435 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 DPYDQ12882 1025 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 KMT5BQ4FZB7 885 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 PLPP4Q5VZY2 271 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 SLFN12LQ6IEE8 588 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 TMEM130Q8N3G9 435 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 ZNF507Q8TCN5 953 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 TCF25Q9BQ70 676 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 ZBP1Q9H171 429 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 GOLGA2P5Q9HBQ8 144 aa16.34■□□□□ 0.21
SCN1B-204ENST00000596348 PUF60Q9UHX1 559 aaKnown RBP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 CPSF3Q9UKF6 684 aaKnown RBP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 AGO2Q9UKV8 859 aaKnown RBP16.34■□□□□ 0.21
SCN1B-204ENST00000596348 HIDE1A8MVS5 230 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 NR1I2O75469 434 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 RPN1P04843 607 aaKnown RBP16.33■□□□□ 0.2
SCN1B-204ENST00000596348 ACOT2P49753 483 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 STK4Q13043 487 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 SKIV2LQ15477 1246 aaKnown RBP16.33■□□□□ 0.2
SCN1B-204ENST00000596348 CRELD2Q6UXH1 353 aaPredicted RBP16.33■□□□□ 0.2
SCN1B-204ENST00000596348 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 RNF168Q8IYW5 571 aaPredicted RBP16.33■□□□□ 0.2
SCN1B-204ENST00000596348 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 MICAL1Q8TDZ2 1067 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 AUTS2Q8WXX7 1259 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 POMGNT1Q8WZA1 660 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
SCN1B-204ENST00000596348 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 ENTPD7Q9NQZ7 604 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 EXOC1Q9NV70 894 aa16.33■□□□□ 0.2
SCN1B-204ENST00000596348 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 UBE4BO95155 1302 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 KIF4AO95239 1232 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 ADRB2P07550 413 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 SPAG1Q07617 926 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 HSP90AA2PQ14568 343 aaPredicted RBP16.32■□□□□ 0.2
SCN1B-204ENST00000596348 POSTNQ15063 836 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 KYAT1Q16773 422 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 BMT2Q1RMZ1 405 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 TMC7Q7Z402 723 aa16.32■□□□□ 0.2
SCN1B-204ENST00000596348 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms