RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 FAM26FQ5R3K3 315 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 KANK3Q6NY19 840 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 KRBA2Q6ZNG9 492 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 EPM2AIP1Q7L775 607 aaPredicted RBP19.92■□□□□ 0.78
ZNF558-204ENST00000596172 GRAMD1CQ8IYS0 662 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 BCL7CQ8WUZ0 217 aaPredicted RBP19.92■□□□□ 0.78
ZNF558-204ENST00000596172 TSPAN18Q96SJ8 248 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 MSTO1Q9BUK6 570 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 FGFBP2Q9BYJ0 223 aa19.92■□□□□ 0.78
ZNF558-204ENST00000596172 REV3LO60673 3130 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 MEFVO15553 781 aaPredicted RBP19.91■□□□□ 0.78
ZNF558-204ENST00000596172 KLRC4O43908 158 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 ADSSP30520 456 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 BMS1Q14692 1282 aaKnown RBP19.91■□□□□ 0.78
ZNF558-204ENST00000596172 FMR1NBQ8N0W7 255 aaPredicted RBP19.91■□□□□ 0.78
ZNF558-204ENST00000596172 ZNF507Q8TCN5 953 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 MICAL1Q8TDZ2 1067 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 CCDC34Q96HJ3 373 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 SLC38A7Q9NVC3 462 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 MARCH5Q9NX47 278 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 COG5Q9UP83 839 aa19.91■□□□□ 0.78
ZNF558-204ENST00000596172 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.91■□□□□ 0.78
ZNF558-204ENST00000596172 TTC26A0AVF1 554 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 GARTP22102 1010 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 PSMD2Q13200 908 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 SEZ6Q53EL9 994 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 TMC7Q7Z402 723 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 SYCP3Q8IZU3 236 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 VPS52Q8N1B4 723 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 MRPL43Q8N983 215 aaKnown RBP19.9■□□□□ 0.78
ZNF558-204ENST00000596172 TMEM87AQ8NBN3 555 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 ENGASEQ8NFI3 743 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 UROC1Q96N76 676 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 ZMAT2Q96NC0 199 aaKnown RBP19.9■□□□□ 0.78
ZNF558-204ENST00000596172 TCF25Q9BQ70 676 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 CPSF3Q9UKF6 684 aaKnown RBP19.9■□□□□ 0.78
ZNF558-204ENST00000596172 PRG3Q9Y2Y8 225 aaPredicted RBP19.9■□□□□ 0.78
ZNF558-204ENST00000596172 IRAK3Q9Y616 596 aa19.9■□□□□ 0.78
ZNF558-204ENST00000596172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 PRPF6O94906 941 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 UBE4BO95155 1302 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 CTSAP10619 480 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 HOXD13P35453 343 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 FAM160A1Q05DH4 1040 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 HYAL1Q12794 435 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 SNW1Q13573 536 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 HSP90AA2PQ14568 343 aaPredicted RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 SMC1AQ14683 1233 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 SKIV2LQ15477 1246 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 CD302Q8IX05 232 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 GLIS3Q8NEA6 775 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 POMGNT1Q8WZA1 660 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 CDCA3Q99618 268 aaPredicted RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 VN1R3Q9BXE9 311 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 ZBP1Q9H171 429 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 RPF1Q9H9Y2 349 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 ENTPD7Q9NQZ7 604 aa19.89■□□□□ 0.77
ZNF558-204ENST00000596172 AGO2Q9UKV8 859 aaKnown RBP19.89■□□□□ 0.77
ZNF558-204ENST00000596172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 FSD2A1L4K1 749 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 TISP43B9A030 160 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 TMEM189-UBE2V1I3L0A0 370 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 KIAA0391O15091 583 aaKnown RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 SOD2P04179 222 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 CXCL8P10145 99 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 TNFSF9P41273 254 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 SNRPFP62306 86 aaKnown RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 DPYDQ12882 1025 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 ENOX2Q16206 610 aaKnown RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 BMT2Q1RMZ1 405 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 CTC1Q2NKJ3 1217 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 GLRA4Q5JXX5 417 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 ZBTB41Q5SVQ8 909 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 SCFD1Q8WVM8 642 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 HLA-CQ95604 372 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 PABPC5Q96DU9 382 aaKnown RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 DDX27Q96GQ7 796 aaKnown RBP19.88■□□□□ 0.77
ZNF558-204ENST00000596172 TIGD1Q96MW7 591 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 IKZF4Q9H2S9 585 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 ADAM28Q9UKQ2 775 aa19.88■□□□□ 0.77
ZNF558-204ENST00000596172 C2orf71A6NGG8 1288 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 CASTOR2A6NHX0 329 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 TADA2AO75478 443 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 CXCL14O95715 111 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 LDHAP00338 332 aaKnown RBP19.87■□□□□ 0.77
ZNF558-204ENST00000596172 RPL9P32969 192 aaKnown RBP19.87■□□□□ 0.77
ZNF558-204ENST00000596172 ZBTB6Q15916 424 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 UPP1Q16831 310 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 KMT5BQ4FZB7 885 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 PLPP4Q5VZY2 271 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 DCLRE1AQ6PJP8 1040 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 ADGRD2Q7Z7M1 963 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 GPR65Q8IYL9 337 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 EFHBQ8N7U6 833 aa19.87■□□□□ 0.77
ZNF558-204ENST00000596172 ATXN2LQ8WWM7 1075 aaKnown RBP19.87■□□□□ 0.77
ZNF558-204ENST00000596172 IPO9Q96P70 1041 aaKnown RBP19.87■□□□□ 0.77
ZNF558-204ENST00000596172 PAAF1Q9BRP4 392 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms