RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	ST6GALNAC4	Q9H4F1	302 aa		10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	KBTBD4	Q9NVX7	518 aa		10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	MARCH5	Q9NX47	278 aa		10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	FAM13B	Q9NYF5	915 aa		10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	CACNG4	Q9UBN1	327 aa		10.06	□□□□□ -0.8
DNMT1-223	ENST00000591239	BDP1	A6H8Y1	2624 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	SMIM28	A0A1B0GU29	152 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	FRMD3	A2A2Y4	597 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	CASTOR2	A6NHX0	329 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	EFEMP2	O95967	443 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	PIGR	P01833	764 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	SOD2	P04179	222 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	IDE	P14735	1019 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	NDUFV1	P49821	464 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	AMPD3	Q01432	767 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	SEZ6	Q53EL9	994 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	XKR4	Q5GH76	650 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	GLRA4	Q5JXX5	417 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	TAS1R1	Q7RTX1	841 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	MAP4K3	Q8IVH8	894 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	VN1R2	Q8NFZ6	395 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	ADAMTS19	Q8TE59	1207 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	PPP1R10	Q96QC0	940 aa	Known RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	PAAF1	Q9BRP4	392 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	LRRC27	Q9C0I9	530 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	MRPL44	Q9H9J2	332 aa	Known RBP	10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	PANK4	Q9NVE7	773 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	TBC1D7	Q9P0N9	293 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	CLEC1B	Q9P126	229 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	ADAM28	Q9UKQ2	775 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239	IRAK3	Q9Y616	596 aa		10.05	□□□□□ -0.8
DNMT1-223	ENST00000591239		A0A0B4J269	797 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	GRXCR2	A6NFK2	248 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	MEFV	O15553	781 aa	Predicted RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TADA2A	O75478	443 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	PPP1R37	O75864	691 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CLTA	P09496	248 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CMA1	P23946	247 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	RBM10	P98175	930 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	KCNC3	Q14003	757 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	PTPN14	Q15678	1187 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CLUL1	Q15846	466 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	SLC10A6	Q3KNW5	377 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	PUS10	Q3MIT2	529 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	ADAL	Q6DHV7	355 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	LLGL2	Q6P1M3	1020 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	FUT10	Q6P4F1	479 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	SLC39A4	Q6P5W5	647 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TMEM184A	Q6ZMB5	413 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CCDC65	Q8IXS2	484 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	RNF168	Q8IYW5	571 aa	Predicted RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TMEM87A	Q8NBN3	555 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	HVCN1	Q96D96	273 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	MSLNL	Q96KJ4	702 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	SNX27	Q96L92	541 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	ZMAT2	Q96NC0	199 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	UHRF1	Q96T88	793 aa	Predicted RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	PYM1	Q9BRP8	204 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	STRA6	Q9BX79	667 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	GPR62	Q9BZJ7	368 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TRIM9	Q9C026	710 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	MAGEF1	Q9HAY2	307 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	OLFML3	Q9NRN5	406 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	MRPL17	Q9NRX2	175 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CNTN3	Q9P232	1028 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	CD207	Q9UJ71	328 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	KCNH3	Q9ULD8	1083 aa		10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TCF20	Q9UGU0	1960 aa	Known RBP	10.04	□□□□□ -0.8
DNMT1-223	ENST00000591239	TRIO	O75962	3097 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	TRIP11	Q15643	1979 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	ANKRD63	C9JTQ0	380 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	C2CD2L	O14523	706 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	OGT	O15294	1046 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	FAM189A1	O60320	539 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	LILRB3	O75022	631 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	CLASP2	O75122	1294 aa	Known RBP	10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KIF4A	O95239	1232 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	GCNT3	O95395	438 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	UROD	P06132	367 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	SRGAP2B	P0DMP2	458 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KCNE1	P15382	129 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	CASP5	P51878	434 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	NUCB2	P80303	420 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KCNA1	Q09470	495 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	COASY	Q13057	564 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KYAT1	Q16773	422 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	L1TD1	Q5T7N2	865 aa	Known RBP	10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KIAA0319	Q5VV43	1072 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	KIAA1841	Q6NSI8	718 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	CNNM4	Q6P4Q7	775 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	SMRP1	Q8NCR6	262 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	HASPIN	Q8TF76	798 aa		10.03	□□□□□ -0.8
DNMT1-223	ENST00000591239	UROC1	Q96N76	676 aa		10.03	□□□□□ -0.8

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