RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 SLC16A3O15427 465 aaKnown RBP13.11□□□□□ -0.31
APOC1-206ENST00000590334 AKAP3O75969 853 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 UPP2O95045 317 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
APOC1-206ENST00000590334 CXCL8P10145 99 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 FGFR1P11362 822 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 KCNE1P15382 129 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 PSMC2P35998 433 aaKnown RBP13.11□□□□□ -0.31
APOC1-206ENST00000590334 CASP4P49662 377 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 CYP24A1Q07973 514 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 CSGALNACT2Q8N6G5 542 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 HELQQ8TDG4 1101 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 APOL6Q9BWW8 343 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
APOC1-206ENST00000590334 ASB7Q9H672 318 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 DERAQ9Y315 318 aa13.11□□□□□ -0.31
APOC1-206ENST00000590334 TRANK1O15050 2925 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 LACTBL1A8MY62 500 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 PTGESO14684 152 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 IKBKBO14920 756 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 MLH1P40692 756 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 CLDN10P78369 228 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 MYL5Q02045 173 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 PPP2R3AQ06190 1150 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 PSMD6Q15008 389 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 SURF1Q15526 300 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 ZBTB6Q15916 424 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 CMTR2Q8IYT2 770 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 RDH13Q8NBN7 331 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 NOC3LQ8WTT2 800 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 GAD1Q99259 594 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 RAD9AQ99638 391 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
APOC1-206ENST00000590334 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 THAP9Q9H5L6 903 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 INSL6Q9Y581 213 aa13.1□□□□□ -0.31
APOC1-206ENST00000590334 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 GNA14O95837 355 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
APOC1-206ENST00000590334 ZNF165P49910 485 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 WNT7BP56706 349 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 GRIK3Q13003 919 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 NCAPHQ15003 741 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 IQCB1Q15051 598 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 NAB2Q15742 525 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
APOC1-206ENST00000590334 FRMD5Q7Z6J6 570 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 IRF2BP1Q8IU81 584 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 TMC2Q8TDI7 906 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 EEF2KMTQ96G04 330 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
APOC1-206ENST00000590334 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 MRPL9Q9BYD2 267 aaKnown RBP13.09□□□□□ -0.31
APOC1-206ENST00000590334 MIOSQ9NXC5 875 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 NFE2L3Q9Y4A8 694 aa13.09□□□□□ -0.31
APOC1-206ENST00000590334 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.09□□□□□ -0.31
APOC1-206ENST00000590334 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 TBKBP1A7MCY6 615 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 THP07101 528 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 IBSPP21815 317 aaPredicted RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 GATMP50440 423 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 SCNN1GP51170 649 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 BFSP1Q12934 665 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 CDKAL1Q5VV42 579 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 FAM109BQ6ICB4 259 aaPredicted RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 DHX40Q8IX18 779 aaKnown RBP13.08□□□□□ -0.32
APOC1-206ENST00000590334 PLEKHO2Q8TD55 490 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 RPS6KC1Q96S38 1066 aa13.08□□□□□ -0.32
APOC1-206ENST00000590334 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms