RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 LMBRD1Q9NUN5 540 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 SPG21Q9NZD8 308 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 DNAJB4Q9UDY4 337 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 HOOK1Q9UJC3 728 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 CPSF3Q9UKF6 684 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 AGO2Q9UKV8 859 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 PRRC2BQ5JSZ5 2229 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 SMIM28A0A1B0GU29 152 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 TTC26A0AVF1 554 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 FGF18O76093 207 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 PBX3P40426 434 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 SLC11A1P49279 550 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 UBE3AQ05086 875 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 KNOP1Q1ED39 458 aaKnown RBP20.44■□□□□ 0.86
MBD1-223ENST00000590215 SEZ6Q53EL9 994 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 ZBTB41Q5SVQ8 909 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 POMGNT1Q8WZA1 660 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 FAM193BQ96PV7 902 aaPredicted RBP20.44■□□□□ 0.86
MBD1-223ENST00000590215 LZTS1Q9Y250 596 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 STXBP5LQ9Y2K9 1186 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
MBD1-223ENST00000590215 COL4A4P53420 1690 aaPredicted RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 KIAA0391O15091 583 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 GRM6O15303 877 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 ALDH2P05091 517 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 FOSL2P15408 326 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 TNFSF9P41273 254 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 TUSC3Q13454 348 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 CAMK1Q14012 370 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 ENOX2Q16206 610 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 MRPL38Q96DV4 380 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 IGSF21Q96ID5 467 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 ZMAT2Q96NC0 199 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 TSPAN18Q96SJ8 248 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 CBWD1Q9BRT8 395 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 ALG13Q9NP73 1137 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 CGNQ9P2M7 1197 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 PCDHA5Q9Y5H7 936 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 MYO7AQ13402 2215 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 TDRD15B5MCY1 1934 aaKnown RBP20.43■□□□□ 0.86
MBD1-223ENST00000590215 TRIP11Q15643 1979 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 CITO14578 2027 aa20.43■□□□□ 0.86
MBD1-223ENST00000590215 NRP1O14786 923 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 SMC2O95347 1197 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 LDHAP00338 332 aaKnown RBP20.42■□□□□ 0.86
MBD1-223ENST00000590215 CXCL8P10145 99 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 TMEM173Q86WV6 379 aaPredicted RBP20.42■□□□□ 0.86
MBD1-223ENST00000590215 TMEM174Q8WUU8 243 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 AGPAT3Q9NRZ7 376 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 RMND1Q9NWS8 449 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 FAN1Q9Y2M0 1017 aa20.42■□□□□ 0.86
MBD1-223ENST00000590215 NT5C1B-RDH14C9J2C7 533 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 EFEMP2O95967 443 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 DNAJB1P25685 340 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 ACOT2P49753 483 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 PTPROQ16827 1216 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 CD302Q8IX05 232 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 NELFCDQ8IXH7 590 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 C12orf56Q8IXR9 622 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 BCL7CQ8WUZ0 217 aaPredicted RBP20.41■□□□□ 0.86
MBD1-223ENST00000590215 POF1BQ8WVV4 589 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 KCTD10Q9H3F6 313 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 RPF1Q9H9Y2 349 aaKnown RBP20.41■□□□□ 0.86
MBD1-223ENST00000590215 SLC38A7Q9NVC3 462 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 MARCH5Q9NX47 278 aa20.41■□□□□ 0.86
MBD1-223ENST00000590215 LACTBL1A8MY62 500 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 EXTL3O43909 919 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 KIF20AO95235 890 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 IGFBP4P22692 258 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 KRT17Q04695 432 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 ZBTB6Q15916 424 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 COBLL1Q53SF7 1204 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 GLRA4Q5JXX5 417 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 ARMCX5Q6P1M9 558 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 DDX53Q86TM3 631 aaKnown RBP20.4■□□□□ 0.86
MBD1-223ENST00000590215 GUF1Q8N442 669 aaKnown RBP20.4■□□□□ 0.86
MBD1-223ENST00000590215 GOLGA5Q8TBA6 731 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 ERCC4Q92889 916 aaPredicted RBP20.4■□□□□ 0.86
MBD1-223ENST00000590215 SMARCE1Q969G3 411 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 TMEM169Q96HH4 297 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 FBXL18Q96ME1 805 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
MBD1-223ENST00000590215 ASB7Q9H672 318 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 STK39Q9UEW8 545 aa20.4■□□□□ 0.86
MBD1-223ENST00000590215 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.4■□□□□ 0.86
MBD1-223ENST00000590215 OR1G1P47890 313 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 PPP2R3AQ06190 1150 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 SOX4Q06945 474 aaPredicted RBP20.39■□□□□ 0.85
MBD1-223ENST00000590215 HS2ST1Q7LGA3 356 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 ZSWIM2Q8NEG5 633 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 UROC1Q96N76 676 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 HSPBP1Q9NZL4 362 aa20.39■□□□□ 0.85
MBD1-223ENST00000590215 PUF60Q9UHX1 559 aaKnown RBP20.39■□□□□ 0.85
MBD1-223ENST00000590215 GOLGA6L22H0YM25 854 aa20.38■□□□□ 0.85
MBD1-223ENST00000590215 PDXKO00764 312 aa20.38■□□□□ 0.85
MBD1-223ENST00000590215 FSCN2O14926 492 aa20.38■□□□□ 0.85
MBD1-223ENST00000590215 CYP3A5P20815 502 aa20.38■□□□□ 0.85
MBD1-223ENST00000590215 ZNF658Q5TYW1 1059 aaPredicted RBP20.38■□□□□ 0.85
MBD1-223ENST00000590215 PDE12Q6L8Q7 609 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms