RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 C15orf39Q6ZRI6 1047 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 TMEM139Q8IV31 216 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 TMEM192Q8IY95 271 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 LMO3Q8TAP4 145 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 BAP1Q92560 729 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 ZNF516Q92618 1163 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 CRISPLD2Q9H0B8 497 aa18.89■□□□□ 0.61
CXXC1-212ENST00000589940 RPF1Q9H9Y2 349 aaKnown RBP18.89■□□□□ 0.61
CXXC1-212ENST00000589940 RPS6KA5O75582 802 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 UCHL3P15374 230 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 CDK7P50613 346 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 LMBRD2Q68DH5 695 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-212ENST00000589940 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
CXXC1-212ENST00000589940 PTPRJQ12913 1337 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 IL18RAPO95256 599 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 NPTXRO95502 500 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 CXCL8P10145 99 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 FECHP22830 423 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 GRM5P41594 1212 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 AP3M2P53677 418 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 TSR1Q2NL82 804 aaKnown RBP18.88■□□□□ 0.61
CXXC1-212ENST00000589940 ZACNQ401N2 412 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 FAM26DQ5JW98 314 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 FAM212AQ96EL1 285 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 NLRC4Q9NPP4 1024 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 PYCARDQ9ULZ3 195 aa18.88■□□□□ 0.61
CXXC1-212ENST00000589940 SGPL1O95470 568 aa18.87■□□□□ 0.61
CXXC1-212ENST00000589940 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
CXXC1-212ENST00000589940 TAS1R2Q8TE23 839 aa18.87■□□□□ 0.61
CXXC1-212ENST00000589940 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
CXXC1-212ENST00000589940 EIF2AQ9BY44 585 aaKnown RBP18.87■□□□□ 0.61
CXXC1-212ENST00000589940 APEX2Q9UBZ4 518 aa18.87■□□□□ 0.61
CXXC1-212ENST00000589940 DAAM1Q9Y4D1 1078 aa18.87■□□□□ 0.61
CXXC1-212ENST00000589940 C4BPAP04003 597 aaKnown RBP18.86■□□□□ 0.61
CXXC1-212ENST00000589940 TDRD10Q5VZ19 366 aaKnown RBP18.86■□□□□ 0.61
CXXC1-212ENST00000589940 ACAP3Q96P50 834 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-212ENST00000589940 NUCKS1Q9H1E3 243 aaKnown RBP18.86■□□□□ 0.61
CXXC1-212ENST00000589940 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 FHOD1Q9Y613 1164 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 LRRC53A6NM62 1247 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 FBXO47Q5MNV8 452 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 PDXDC1Q6P996 788 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 OR5B17Q8NGF7 314 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 SEMA4DQ92854 862 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 FAM84AQ96KN4 292 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 CCDC94Q9BW85 323 aaPredicted RBP18.86■□□□□ 0.61
CXXC1-212ENST00000589940 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 PLAGL2Q9UPG8 496 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 MROH7Q68CQ1 1323 aa18.86■□□□□ 0.61
CXXC1-212ENST00000589940 GPR182O15218 404 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 TFRCP02786 760 aaKnown RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 CKBP12277 381 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 RFX1P22670 979 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 HNRNPH3P31942 346 aaKnown RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 BIRC3Q13489 604 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 MEA1Q16626 185 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 ZNF618Q5T7W0 954 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 ASB7Q9H672 318 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 ZNHIT6Q9NWK9 470 aaKnown RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 ESPNB1AK53 854 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 MEFVO15553 781 aaPredicted RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 ARHGAP6O43182 974 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 MSNP26038 577 aaKnown RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 SLC10A6Q3KNW5 377 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 IQCEQ6IPM2 695 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 FAM126BQ8IXS8 530 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 AGO3Q9H9G7 860 aaKnown RBP18.85■□□□□ 0.61
CXXC1-212ENST00000589940 CHST12Q9NRB3 414 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
CXXC1-212ENST00000589940 LACTBL1A8MY62 500 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 LRRN2O75325 713 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 MNX1P50219 401 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-212ENST00000589940 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
CXXC1-212ENST00000589940 PHLDB3Q6NSJ2 640 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 GJB7Q6PEY0 223 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 WDR59Q6PJI9 974 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 CYP26C1Q6V0L0 522 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 TMTC1Q8IUR5 882 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 EFCAB13Q8IY85 973 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 SYN2Q92777 582 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-212ENST00000589940 SPAG5Q96R06 1193 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 SQORQ9Y6N5 450 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 GHRP10912 638 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 LPIN1Q14693 890 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 TWF2Q6IBS0 349 aaKnown RBP18.84■□□□□ 0.61
CXXC1-212ENST00000589940 USP38Q8NB14 1042 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 MTMR12Q9C0I1 747 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 ERVK-5Q9HDB9 667 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 SNTG2Q9NY99 539 aa18.84■□□□□ 0.61
CXXC1-212ENST00000589940 AJAP1Q9UKB5 411 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-212ENST00000589940 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.6
CXXC1-212ENST00000589940 HLA-DRAP01903 254 aa18.83■□□□□ 0.6
CXXC1-212ENST00000589940 PIK3CAP42336 1068 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms