RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SNTG2Q9NY99 539 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 RWDD3Q9Y3V2 267 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 MRPL42Q9Y6G3 142 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 ABLIM1O14639 778 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 AKAP5P24588 427 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 MLH1P40692 756 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 MCL1Q07820 350 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 NOMO2Q5JPE7 1267 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 SPOUT1Q5T280 376 aaKnown RBP23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 SAMD11Q96NU1 681 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 CCDC94Q9BW85 323 aaPredicted RBP23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 TTYH1Q9H313 450 aaPredicted RBP23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 THAP9Q9H5L6 903 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 MTUS1Q9ULD2 1270 aa23.15■■□□□ 1.3
R3HDM4-204ENST00000589428 CLIC2O15247 247 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 OFD1O75665 1012 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 RECQL4O94761 1208 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 NR3C1P04150 777 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 NR2F2P24468 414 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 GRM5P41594 1212 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 FKBP3Q00688 224 aaKnown RBP23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 SLC39A4Q6P5W5 647 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 NOC3LQ8WTT2 800 aaKnown RBP23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 RPS6KC1Q96S38 1066 aa23.14■■□□□ 1.3
R3HDM4-204ENST00000589428 ARL5CA6NH57 179 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 ANKRD63C9JTQ0 380 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 AP5Z1O43299 807 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 YARSP54577 528 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 NFIL3Q16649 462 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 SLFN12LQ6IEE8 588 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 THNSL1Q8IYQ7 743 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 CEP120Q8N960 986 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 FAM161BQ96MY7 647 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 GAD1Q99259 594 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 CERS4Q9HA82 394 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 KANSL3Q9P2N6 904 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 CTNNB1P35222 781 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 OSTNP61366 133 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 ERVK-21P61565 698 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 RNASELQ05823 741 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 ARNTL2Q8WYA1 636 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 CLP1Q92989 425 aaKnown RBP23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 C17orf80Q9BSJ5 609 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 MSTO1Q9BUK6 570 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 AAASQ9NRG9 546 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 TOPORSQ9NS56 1045 aaPredicted RBP23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 TBC1D13Q9NVG8 400 aa23.13■■□□□ 1.29
R3HDM4-204ENST00000589428 CHD9Q3L8U1 2897 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 ADSSP30520 456 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 SNRPFP62306 86 aaKnown RBP23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 ADAM9Q13443 819 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 RALGAPA2Q2PPJ7 1873 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 Q7L0L9 218 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 SPRED2Q7Z698 418 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 C12orf56Q8IXR9 622 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 TMEM192Q8IY95 271 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 DEFB123Q8N688 67 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 ZFP42Q96MM3 310 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 CEP63Q96MT8 703 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 CBWD1Q9BRT8 395 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 KLK14Q9P0G3 267 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 CGNQ9P2M7 1197 aaKnown RBP23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 NLRC5Q86WI3 1866 aa23.12■■□□□ 1.29
R3HDM4-204ENST00000589428 SZT2Q5T011 3432 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 INPPL1O15357 1258 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 LAG3P18627 525 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 SCNN1GP51170 649 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 KYAT1Q16773 422 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 TMEM174Q8WUU8 243 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 POMGNT1Q8WZA1 660 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 ACAP3Q96P50 834 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 DMAC2Q9NW81 257 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 HCSTQ9UBK5 93 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 KCNJ18B7U540 433 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 OGTO15294 1046 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 POMCP01189 267 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 RPL13P26373 211 aaKnown RBP23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 CYP2J2P51589 502 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 KCNJ12Q14500 433 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 EPC2Q52LR7 807 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 SLC9A9Q8IVB4 645 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 FBXO22Q8NEZ5 403 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 CNOT6LQ96LI5 555 aaKnown RBP23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 FAM193BQ96PV7 902 aaPredicted RBP23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 HAPLN2Q9GZV7 340 aa23.11■■□□□ 1.29
R3HDM4-204ENST00000589428 A0A0B4J269 797 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 CETN3O15182 167 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 FGFR1OPO95684 399 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 LINC00271P0C7V0 271 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 PLCB2Q00722 1185 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 TCP11X2Q5H9J9 407 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 ARMCX5Q6P1M9 558 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 SARM1Q6SZW1 724 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 CWH43Q9H720 699 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 PCDHB12Q9Y5F1 795 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 STYXL1Q9Y6J8 313 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 KIAA1671Q9BY89 1806 aa23.1■■□□□ 1.29
R3HDM4-204ENST00000589428 ZC3H11AO75152 810 aaKnown RBP eCLIP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 CLTAP09496 248 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms