RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PPP1R10Q96QC0 940 aaKnown RBP22.06■■□□□ 1.12
DDX39A-207ENST00000588542 MSTO1Q9BUK6 570 aa22.06■■□□□ 1.12
DDX39A-207ENST00000588542 TOPORSQ9NS56 1045 aaPredicted RBP22.06■■□□□ 1.12
DDX39A-207ENST00000588542 NRP1O14786 923 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 ALDH2P05091 517 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 THP07101 528 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 CLTAP09496 248 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 UBE3AQ05086 875 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 STK4Q13043 487 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 PTPROQ16827 1216 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 GLRA4Q5JXX5 417 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 SLFN12LQ6IEE8 588 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 STXBP4Q6ZWJ1 553 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 IGSF21Q96ID5 467 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 TIGD1Q96MW7 591 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 ZMAT2Q96NC0 199 aaKnown RBP22.05■■□□□ 1.12
DDX39A-207ENST00000588542 TMEM206Q9H813 350 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 EXOC1Q9NV70 894 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 CNTN3Q9P232 1028 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 LZTS1Q9Y250 596 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 FAN1Q9Y2M0 1017 aa22.05■■□□□ 1.12
DDX39A-207ENST00000588542 SMIM28A0A1B0GU29 152 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 CARNS1A5YM72 827 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 CXCL8P10145 99 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 OR1G1P47890 313 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 PSMD2Q13200 908 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 POSTNQ15063 836 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 SYCP3Q8IZU3 236 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 KIAA0895Q8NCT3 520 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 POMGNT1Q8WZA1 660 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 MARCH5Q9NX47 278 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 CACNG4Q9UBN1 327 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 CPSF3Q9UKF6 684 aaKnown RBP22.04■■□□□ 1.12
DDX39A-207ENST00000588542 AGO2Q9UKV8 859 aaKnown RBP22.04■■□□□ 1.12
DDX39A-207ENST00000588542 UBE4BO95155 1302 aa22.04■■□□□ 1.12
DDX39A-207ENST00000588542 TTC26A0AVF1 554 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 F8W810 466 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 RHOBTB3O94955 611 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 ADRB2P07550 413 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 KCNE1P15382 129 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 IRS1P35568 1242 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 ERVFC1P60507 584 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 UBE2HP62256 183 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 TUSC3Q13454 348 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 PNOCQ13519 176 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 CCDC85BQ15834 202 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-207ENST00000588542 ENOX2Q16206 610 aaKnown RBP22.03■■□□□ 1.12
DDX39A-207ENST00000588542 KYAT1Q16773 422 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 BMT2Q1RMZ1 405 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 CRELD2Q6UXH1 353 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-207ENST00000588542 MICALL1Q8N3F8 863 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 ZSWIM2Q8NEG5 633 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 PAAF1Q9BRP4 392 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 VN1R3Q9BXE9 311 aa22.03■■□□□ 1.12
DDX39A-207ENST00000588542 PRG3Q9Y2Y8 225 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-207ENST00000588542 TGFB1I1O43294 461 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 PRPF40AO75400 957 aaKnown RBP22.02■■□□□ 1.12
DDX39A-207ENST00000588542 CSPG5O95196 566 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 GARTP22102 1010 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 ACOT2P49753 483 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 KRT17Q04695 432 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 NELFCDQ8IXH7 590 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 RABGGTAQ92696 567 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 TMEM169Q96HH4 297 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 CBWD1Q9BRT8 395 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 PLEKHA5Q9HAU0 1116 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 TLR9Q9NR96 1032 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 PCDHGC5Q9Y5F6 944 aa22.02■■□□□ 1.12
DDX39A-207ENST00000588542 CASTOR2A6NHX0 329 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 LACTBL1A8MY62 500 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 FSCN2O14926 492 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 EFEMP2O95967 443 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 SOX4Q06945 474 aaPredicted RBP22.01■■□□□ 1.11
DDX39A-207ENST00000588542 KCNB1Q14721 858 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 DDX53Q86TM3 631 aaKnown RBP22.01■■□□□ 1.11
DDX39A-207ENST00000588542 PPM1EQ8WY54 764 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 CCDC34Q96HJ3 373 aa22.01■■□□□ 1.11
DDX39A-207ENST00000588542 RPF1Q9H9Y2 349 aaKnown RBP22.01■■□□□ 1.11
DDX39A-207ENST00000588542 PUF60Q9UHX1 559 aaKnown RBP22.01■■□□□ 1.11
DDX39A-207ENST00000588542 VWA8A3KMH1 1905 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 XIRP2A4UGR9 3374 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 TIGD5Q53EQ6 642 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 ELOA2Q8IYF1 753 aaPredicted RBP22■■□□□ 1.11
DDX39A-207ENST00000588542 SPATA20Q8TB22 786 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 C18orf25Q96B23 403 aaPredicted RBP22■■□□□ 1.11
DDX39A-207ENST00000588542 SAAL1Q96ER3 474 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 PCIF1Q9H4Z3 704 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
DDX39A-207ENST00000588542 GOLGA2P5Q9HBQ8 144 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 BRWD1Q9NSI6 2320 aa22■■□□□ 1.11
DDX39A-207ENST00000588542 KINO60870 393 aaKnown RBP21.99■■□□□ 1.11
DDX39A-207ENST00000588542 SPAG1Q07617 926 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 ZBTB6Q15916 424 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 TCEAL5Q5H9L2 206 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 ARMCX5Q6P1M9 558 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 RNF168Q8IYW5 571 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-207ENST00000588542 ERCC4Q92889 916 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-207ENST00000588542 COLEC11Q9BWP8 271 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 ZBP1Q9H171 429 aa21.99■■□□□ 1.11
DDX39A-207ENST00000588542 AGPAT3Q9NRZ7 376 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms