RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 DIRC3C9JPN6 131 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 MGAT1P26572 445 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 MASP1P48740 699 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 MRPS9P82933 396 aaKnown RBP5.81□□□□□ -1.48
VMP1-205ENST00000587470 ANKS6Q68DC2 871 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 EFCAB12Q6NXP0 572 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 GIMAP6Q6P9H5 292 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 KCNV1Q6PIU1 500 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 GDF7Q7Z4P5 450 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 MDM1Q8TC05 714 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 CHAC2Q8WUX2 184 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 ZNF480Q8WV37 535 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 MYEOVQ96EZ4 313 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 AGAP2Q99490 1192 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 ZNF768Q9H5H4 540 aaKnown RBP5.81□□□□□ -1.48
VMP1-205ENST00000587470 TRPM5Q9NZQ8 1165 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 EDARQ9UNE0 448 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 ATP10BO94823 1461 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 CLIP1P30622 1438 aa5.81□□□□□ -1.48
VMP1-205ENST00000587470 DENND4BO75064 1496 aaPredicted RBP5.8□□□□□ -1.48
VMP1-205ENST00000587470 GAGE12BA1L429 117 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 GAGE12HA6NDE8 117 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 GOLGA8AA7E2F4 631 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 LEFTY2O00292 366 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 RNASET2O00584 256 aaKnown RBP5.8□□□□□ -1.48
VMP1-205ENST00000587470 IGSF3O75054 1194 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 GCP02774 474 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 FSTL1Q12841 308 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 FAPQ12884 760 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 CSRP2Q16527 193 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 BMT2Q1RMZ1 405 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 CT47A1Q5JQC4 288 aaPredicted RBP5.8□□□□□ -1.48
VMP1-205ENST00000587470 MBNL2Q5VZF2 373 aaKnown RBP5.8□□□□□ -1.48
VMP1-205ENST00000587470 SDE2Q6IQ49 451 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 BTNL9Q6UXG8 535 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 VRK3Q8IV63 474 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 LMBR1Q8WVP7 490 aa5.8□□□□□ -1.48
VMP1-205ENST00000587470 NUP153P49790 1475 aaKnown RBP5.79□□□□□ -1.48
VMP1-205ENST00000587470 RHOBTB3O94955 611 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 RBP3P10745 1247 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 MTHFD2P13995 350 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 ZFP36P26651 326 aaKnown RBP5.79□□□□□ -1.48
VMP1-205ENST00000587470 FAM189BP81408 668 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 CDK17Q00537 523 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 NHLH2Q02577 135 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 GJC2Q5T442 439 aaPredicted RBP5.79□□□□□ -1.48
VMP1-205ENST00000587470 FAM180AQ6UWF9 173 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 SYT12Q8IV01 421 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 AFAP1L2Q8N4X5 818 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 GPR156Q8NFN8 814 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 OR10H5Q8NGA6 315 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 AUTS2Q8WXX7 1259 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 TFAP2CQ92754 450 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 FATE1Q969F0 183 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 ZG16BQ96DA0 208 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 POGKQ9P215 609 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 NCOA1Q15788 1441 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 FRMPD1Q5SYB0 1578 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 COL4A3Q01955 1670 aa5.79□□□□□ -1.48
VMP1-205ENST00000587470 MAGI2Q86UL8 1455 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 TMEM200CA6NKL6 621 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 AKR1B10O60218 316 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CLSTN1O94985 981 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CPEP16870 476 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 ZSCAN20P17040 1043 aaPredicted RBP5.78□□□□□ -1.48
VMP1-205ENST00000587470 TGM1P22735 817 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CANXP27824 592 aaKnown RBP5.78□□□□□ -1.48
VMP1-205ENST00000587470 FLT3LGP49771 235 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 RNASE9P60153 205 aaKnown RBP5.78□□□□□ -1.48
VMP1-205ENST00000587470 TAP1Q03518 808 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 MST1LQ2TV78 715 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 FAM47AQ5JRC9 791 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 MFSD14BQ5SR56 506 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 PRAMEF14Q5SWL7 426 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 PLXDC1Q8IUK5 500 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CMIPQ8IY22 773 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 ZFP28Q8NHY6 868 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 RIN2Q8WYP3 895 aaPredicted RBP5.78□□□□□ -1.48
VMP1-205ENST00000587470 CEP95Q96GE4 821 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 ORAI2Q96SN7 254 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 AKIP1Q9NQ31 210 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 PACSIN3Q9UKS6 424 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 CHST2Q9Y4C5 530 aa5.78□□□□□ -1.48
VMP1-205ENST00000587470 ABCA9Q8IUA7 1624 aa5.77□□□□□ -1.48
VMP1-205ENST00000587470 FMN1Q68DA7 1419 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 CENPVL1A0A0U1RR11 272 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 PJA2O43164 708 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 B3GALT2O43825 422 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 ADSLP30566 484 aaPredicted RBP5.77□□□□□ -1.49
VMP1-205ENST00000587470 PTPN7P35236 360 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 SCAND1P57086 179 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 COL10A1Q03692 680 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 STAT4Q14765 748 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 ADRM1Q16186 407 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 MUM1Q2TAK8 710 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 KCNK18Q7Z418 384 aa5.77□□□□□ -1.49
VMP1-205ENST00000587470 OR7D4Q8NG98 312 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms