RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PKD1L2Q7Z442 2459 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 DSPP15924 2871 aaKnown RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 CASTOR2A6NHX0 329 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 SHISA7A6NL88 538 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 ASAP2O43150 1006 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 ADAM12O43184 909 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
SDF2-204ENST00000587338 KIF4AO95239 1232 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 NPTXRO95502 500 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 CCR3P51677 355 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 NLRP5P59047 1200 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 SIM2Q14190 667 aaPredicted RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 GRM2Q14416 872 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 CSRP2Q16527 193 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 IL31Q6EBC2 164 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 CDR2LQ86X02 465 aaPredicted RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 LNX1Q8TBB1 728 aaPredicted RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 TCP11Q8WWU5 503 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 MTRQ99707 1265 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 SLC26A6Q9BXS9 759 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 SLKQ9H2G2 1235 aaPredicted RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 BRD9Q9H8M2 597 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 WRAP73Q9P2S5 460 aaPredicted RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 DNMT3BQ9UBC3 853 aaKnown RBP9.5□□□□□ -0.89
SDF2-204ENST00000587338 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 SDK1Q7Z5N4 2213 aa9.5□□□□□ -0.89
SDF2-204ENST00000587338 MAN2B1O00754 1011 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 B4GALT5O43286 388 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 RHOP08100 348 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 CPA1P15085 419 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 CEBPBP17676 345 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 ARF4P18085 180 aaPredicted RBP9.49□□□□□ -0.89
SDF2-204ENST00000587338 OR1D2P34982 312 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 PTENP60484 403 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 MBTD1Q05BQ5 628 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 SRSF5Q13243 272 aaKnown RBP9.49□□□□□ -0.89
SDF2-204ENST00000587338 TUSC3Q13454 348 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 TFDP1Q14186 410 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 PCBP1Q15365 356 aaKnown RBP eCLIP9.49□□□□□ -0.89
SDF2-204ENST00000587338 AMHR2Q16671 573 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 SLC5A9Q2M3M2 681 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 XKR9Q5GH70 373 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 N4BP2L1Q5TBK1 243 aaPredicted RBP9.49□□□□□ -0.89
SDF2-204ENST00000587338 TANGO2Q6ICL3 276 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 SLC27A1Q6PCB7 646 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 FAM3CQ92520 227 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 BRF1Q92994 677 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 LXNQ9BS40 222 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 IER2Q9BTL4 223 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 GDE1Q9NZC3 331 aa9.49□□□□□ -0.89
SDF2-204ENST00000587338 DAXXQ9UER7 740 aaPredicted RBP9.49□□□□□ -0.89
SDF2-204ENST00000587338 DDX25Q9UHL0 483 aaKnown RBP9.49□□□□□ -0.89
SDF2-204ENST00000587338 NOTCH4Q99466 2003 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 CYP3A7-CYP3A51PA0A087WV96 503 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 CHURC1-FNTBB4DL54 471 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 EPB41L2O43491 1005 aaKnown RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 SLC37A4O43826 429 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 P4HBP07237 508 aaKnown RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 POU2F2P09086 479 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 CYP3A7P24462 503 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 PMLP29590 882 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 YWHABP31946 246 aaKnown RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 HSPA4P34932 840 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 CXCL12P48061 93 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 FNTBP49356 437 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 SATB1Q01826 763 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 ELAVL2Q12926 359 aaKnown RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 PPP2R5CQ13362 524 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 CAPSQ13938 189 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 KRT32Q14532 448 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 MXD4Q14582 209 aaPredicted RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 AASDHQ4L235 1098 aaPredicted RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 PDXDC1Q6P996 788 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 RASEFQ8IZ41 740 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 ELSPBP1Q96BH3 223 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 RNF26Q9BY78 433 aaPredicted RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 LMAN1LQ9HAT1 526 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
SDF2-204ENST00000587338 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 PIAS3Q9Y6X2 628 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 ZMYM2Q9UBW7 1377 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 NBEAQ8NFP9 2946 aa9.48□□□□□ -0.89
SDF2-204ENST00000587338 HRO43593 1189 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 FOXD2O60548 495 aaPredicted RBP9.47□□□□□ -0.89
SDF2-204ENST00000587338 HMGB1P09429 215 aaKnown RBP9.47□□□□□ -0.89
SDF2-204ENST00000587338 FCARP24071 287 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 CYP4A11Q02928 519 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 RAB33AQ14088 237 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 CTTNQ14247 550 aaKnown RBP9.47□□□□□ -0.89
SDF2-204ENST00000587338 INF2Q27J81 1249 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 FAM78AQ5JUQ0 283 aa9.47□□□□□ -0.89
SDF2-204ENST00000587338 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
SDF2-204ENST00000587338 NCAPH2Q6IBW4 605 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms