RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 PRG3Q9Y2Y8 225 aaPredicted RBP23.39■■□□□ 1.33
RETREG3-204ENST00000586796 PCDHA5Q9Y5H7 936 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 ZMYM2Q9UBW7 1377 aa23.39■■□□□ 1.33
RETREG3-204ENST00000586796 UBE4BO95155 1302 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 GOLGA6L22H0YM25 854 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 MEFVO15553 781 aaPredicted RBP23.38■■□□□ 1.33
RETREG3-204ENST00000586796 ALDH2P05091 517 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 SPAG1Q07617 926 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 KYAT1Q16773 422 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 SLC10A6Q3KNW5 377 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 COLGALT2Q8IYK4 626 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 SLC39A11Q8N1S5 342 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 FAM213AQ9BRX8 229 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 MAPK8IP1Q9UQF2 711 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 FAN1Q9Y2M0 1017 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 RALGAPA2Q2PPJ7 1873 aa23.38■■□□□ 1.33
RETREG3-204ENST00000586796 SMIM28A0A1B0GU29 152 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 GOLGA8IPA6NC78 632 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 CASTOR2A6NHX0 329 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 GOLGA8JA6NMD2 632 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 NRP1O14786 923 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 CLIC2O15247 247 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 TGFB1I1O43294 461 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 FAM189A1O60320 539 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 GARTP22102 1010 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 PPM1AP35813 382 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 CAMK4Q16566 473 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 KNOP1Q1ED39 458 aaKnown RBP23.37■■□□□ 1.33
RETREG3-204ENST00000586796 BMT2Q1RMZ1 405 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 ISM2Q6H9L7 571 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 ALKAL1Q6UXT8 129 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 TMEM173Q86WV6 379 aaPredicted RBP23.37■■□□□ 1.33
RETREG3-204ENST00000586796 ZSWIM2Q8NEG5 633 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 SPPL3Q8TCT6 385 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 TMEM175Q9BSA9 504 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 RMND1Q9NWS8 449 aa23.37■■□□□ 1.33
RETREG3-204ENST00000586796 CPSF3Q9UKF6 684 aaKnown RBP23.37■■□□□ 1.33
RETREG3-204ENST00000586796 COL4A4P53420 1690 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-204ENST00000586796 LACTBL1A8MY62 500 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 KRT17Q04695 432 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 PPP2R3AQ06190 1150 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 DSC1Q08554 894 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 TUSC3Q13454 348 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 ENOX2Q16206 610 aaKnown RBP23.36■■□□□ 1.33
RETREG3-204ENST00000586796 ELOA2Q8IYF1 753 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-204ENST00000586796 SMYD4Q8IYR2 804 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-204ENST00000586796 POF1BQ8WVV4 589 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 TMEM169Q96HH4 297 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 ZMAT2Q96NC0 199 aaKnown RBP23.36■■□□□ 1.33
RETREG3-204ENST00000586796 GSDMAQ96QA5 445 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 AGPAT3Q9NRZ7 376 aa23.36■■□□□ 1.33
RETREG3-204ENST00000586796 DNAJB1P25685 340 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 PTPROQ16827 1216 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 XKR4Q5GH76 650 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 HS2ST1Q7LGA3 356 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 BCL7CQ8WUZ0 217 aaPredicted RBP23.35■■□□□ 1.33
RETREG3-204ENST00000586796 PPM1EQ8WY54 764 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 PPP1R10Q96QC0 940 aaKnown RBP23.35■■□□□ 1.33
RETREG3-204ENST00000586796 CNTN3Q9P232 1028 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 MTCH2Q9Y6C9 303 aa23.35■■□□□ 1.33
RETREG3-204ENST00000586796 CHD7Q9P2D1 2997 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 F8W810 466 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 CCDC85BQ15834 202 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-204ENST00000586796 CRELD2Q6UXH1 353 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-204ENST00000586796 MICAL1Q8TDZ2 1067 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 C18orf25Q96B23 403 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-204ENST00000586796 KIF12Q96FN5 646 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 IGSF21Q96ID5 467 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 PAAF1Q9BRP4 392 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 PLEKHA5Q9HAU0 1116 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 GOLGA2P5Q9HBQ8 144 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 HSPBP1Q9NZL4 362 aa23.34■■□□□ 1.33
RETREG3-204ENST00000586796 PUF60Q9UHX1 559 aaKnown RBP23.34■■□□□ 1.33
RETREG3-204ENST00000586796 TTC26A0AVF1 554 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 EXTL3O43909 919 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 KIF20AO95235 890 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 LDHAP00338 332 aaKnown RBP23.33■■□□□ 1.33
RETREG3-204ENST00000586796 KCNE1P15382 129 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 CYP2J2P51589 502 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 PLCB3Q01970 1234 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 NAB2Q15742 525 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 GPD1LQ8N335 351 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 MRPL38Q96DV4 380 aaKnown RBP23.33■■□□□ 1.33
RETREG3-204ENST00000586796 COLEC11Q9BWP8 271 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 SLC38A7Q9NVC3 462 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 MAN1B1Q9UKM7 699 aa23.33■■□□□ 1.33
RETREG3-204ENST00000586796 TDRD15B5MCY1 1934 aaKnown RBP23.33■■□□□ 1.32
RETREG3-204ENST00000586796 CARNS1A5YM72 827 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 BIN1O00499 593 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 SOX4Q06945 474 aaPredicted RBP23.32■■□□□ 1.32
RETREG3-204ENST00000586796 ZNF658Q5TYW1 1059 aaPredicted RBP23.32■■□□□ 1.32
RETREG3-204ENST00000586796 TMEM130Q8N3G9 435 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 RDH13Q8NBN7 331 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 SPATA20Q8TB22 786 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 HASPINQ8TF76 798 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 LMAN2LQ9H0V9 348 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 MARCH5Q9NX47 278 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 STXBP5LQ9Y2K9 1186 aa23.32■■□□□ 1.32
RETREG3-204ENST00000586796 CA8P35219 290 aa23.31■■□□□ 1.32
RETREG3-204ENST00000586796 IRS1P35568 1242 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms