RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 NUCB1Q02818 461 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 GRIK3Q13003 919 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PSMD5Q16401 504 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LRCH2Q5VUJ6 765 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MIER3Q7Z3K6 550 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SMG8Q8ND04 991 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 EXOC6Q8TAG9 804 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SLC7A14Q8TBB6 771 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 BICD2Q8TD16 824 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DEPDC1BQ8WUY9 529 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TCP11Q8WWU5 503 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 B3GALT6Q96L58 329 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CLSTN3Q9BQT9 956 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 APOL6Q9BWW8 343 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DNMT3BQ9UBC3 853 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SDK1Q7Z5N4 2213 aa9.76□□□□□ -0.85
CDK5RAP3-224ENST00000582275 COL4A3Q01955 1670 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SHISA7A6NL88 538 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MICAL2O94851 1124 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 EPN2O95208 641 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RHOP08100 348 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CHRNB1P11230 501 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RFC5P40937 340 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 USP11P51784 963 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PSMC5P62195 406 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SPIRE1Q08AE8 756 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PTGDRQ13258 359 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RAB33AQ14088 237 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RTN1Q16799 776 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DGKKQ5KSL6 1271 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RTP2Q5QGT7 225 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PSAPL1Q6NUJ1 521 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PRSS55Q6UWB4 352 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CACNA2D4Q7Z3S7 1137 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 WDR5BQ86VZ2 330 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CEP57Q86XR8 500 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 KSR1Q8IVT5 923 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ING5Q8WYH8 240 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MCRS1Q96EZ8 462 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZFP42Q96MM3 310 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ADAM33Q9BZ11 813 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PLA2G2FQ9BZM2 168 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZMYND12Q9H0C1 365 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CSRNP2Q9H175 543 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 UNC45AQ9H3U1 944 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RXFP3Q9NSD7 469 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TAF6LQ9Y6J9 622 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PIAS3Q9Y6X2 628 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TDRD15B5MCY1 1934 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SPAG17Q6Q759 2223 aa9.75□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CCDC163A0A0D9SF12 145 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SRRM3A6NNA2 597 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 F8W810 466 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 AXIN1O15169 862 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MSH4O15457 936 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 STBD1O95210 358 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SRGAP2CP0DJJ0 459 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PTPN2P17706 415 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PSMC3P17980 439 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 NOVA1P51513 510 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LAMTOR4Q0VGL1 99 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CAMK2BQ13554 666 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SF3A2Q15428 464 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PFKFB3Q16875 520 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 FAM171A1Q5VUB5 890 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 DAB2IPQ5VWQ8 1189 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RNF43Q68DV7 783 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 TANGO2Q6ICL3 276 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 APOA5Q6Q788 366 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RAB11FIP4Q86YS3 637 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 MAP4K3Q8IVH8 894 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LNX1Q8TBB1 728 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 PRPF31Q8WWY3 499 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 E2F7Q96AV8 911 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LENG9Q96B70 501 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ARRDC1-AS1Q9H2J1 176 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 C8orf33Q9H7E9 229 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZNF334Q9HCZ1 680 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 VPS45Q9NRW7 570 aa9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 RBM8AQ9Y5S9 174 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CCDC196A0A1B0GTZ2 297 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 K7ESF4 209 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZNF263O14978 683 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 SGSM2O43147 1006 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ZBTB43O43298 467 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 AKAP3O75969 853 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 LRG1P02750 347 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 CHMLP26374 656 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 GDI1P31150 447 aa9.73□□□□□ -0.85
CDK5RAP3-224ENST00000582275 ELF1P32519 619 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms