RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 KCNN4O15554 427 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 AKAP10O43572 662 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 KRT16P08779 473 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 KCNA2P16389 499 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 NME3Q13232 169 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CYLC2Q14093 348 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CYGBQ8WWM9 190 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MRPL4Q9BYD3 311 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 UGGT1Q9NYU2 1555 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 UTYO14607 1347 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CPDO75976 1380 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CYP26A1O43174 497 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 RAD51CO43502 376 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 HNRNPH1P31943 449 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 TAGAPQ8N103 731 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MMGT1Q8N4V1 131 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 ISCUQ9H1K1 167 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 UVRAGQ9P2Y5 699 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CDYLQ9Y232 598 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 NEO1Q92859 1461 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 PSMD3O43242 534 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 SCP2P22307 547 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 QARSP47897 775 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TTC39BQ5VTQ0 682 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 DPY19L2Q6NUT2 758 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 STX19Q8N4C7 294 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 ERP27Q96DN0 273 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TMA16Q96EY4 203 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TRIM10Q9UDY6 481 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 SLC26A4O43511 780 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 CDH16O75309 829 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TRIM49P0CI25 452 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TRIM49CP0CI26 452 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 USP11P51784 963 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 PRAMEP78395 509 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 LXNQ9BS40 222 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 CASS4Q9NQ75 786 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 NPHP3-ACAD11A0A0J9YXS1 232 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 EFCAB14O75071 495 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 S100A5P33763 92 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 OR2W6PQ8NHA6 318 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 SUGT1Q9Y2Z0 365 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 POLR1AO95602 1720 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 TSPY1Q01534 308 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 IRX2Q9BZI1 471 aaPredicted RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 CDV3Q9UKY7 258 aaKnown RBP15.32■□□□□ 0.04
CSNK1D-217ENST00000581241 WDR47O94967 919 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 NEU2Q9Y3R4 380 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 FAM107AO95990 144 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 GH2P01242 217 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 VHLP40337 213 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 ZNF200P98182 395 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 LRRC36Q1X8D7 754 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 C3orf20Q8ND61 904 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 RBM15Q96T37 977 aaKnown RBP eCLIP15.31■□□□□ 0.049e-8■■■□□ 17.2
CSNK1D-217ENST00000581241 BNIP3LO60238 219 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 EYA4O95677 639 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 MYL3P08590 195 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 UBTFL6P0CB48 400 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 LTKP29376 864 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 PSMD7P51665 324 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 KCNQ4P56696 695 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 ADSSL1Q8N142 457 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 SENP7Q9BQF6 1050 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 KLHL11Q9NVR0 708 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 ZFATQ9P243 1243 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 MBD5Q9P267 1494 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 SERPINI2O75830 405 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 TDP2O95551 362 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 PSMC5P62195 406 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 NAB2Q15742 525 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 TC2NQ8N9U0 490 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 EME1Q96AY2 570 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 PGBD4Q96DM1 585 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 NSL1Q96IY1 281 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 NR1H4Q96RI1 486 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 RBAKQ9NYW8 714 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 CDH2P19022 906 aaPredicted RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 VCAM1P19320 739 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 ADORA2BP29275 332 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 IRAK1P51617 712 aa15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-217ENST00000581241 KYAT1Q16773 422 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms