RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SSX2IPQ9Y2D8 614 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 HCFC2Q9Y5Z7 792 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 C2orf16Q68DN1 1984 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 A0A087X0B3 334 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 F8W810 466 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 MBTPS2O43462 519 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 CLASP2O75122 1294 aaKnown RBP11.91□□□□□ -0.5
NDEL1-208ENST00000580237 KIF4AO95239 1232 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 ADH1AP07327 375 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 PROZP22891 400 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 KLRC2P26717 231 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 NMT1P30419 496 aaKnown RBP11.91□□□□□ -0.5
NDEL1-208ENST00000580237 KRT85P78386 507 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 ELMSAN1Q6PJG2 1045 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 SMRP1Q8NCR6 262 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 VN1R2Q8NFZ6 395 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
NDEL1-208ENST00000580237 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
NDEL1-208ENST00000580237 APOL5Q9BWW9 433 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 CUEDC2Q9H467 287 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 PTPRHQ9HD43 1115 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 DZANK1Q9NVP4 752 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 CLEC1BQ9P126 229 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 ATP6V1DQ9Y5K8 247 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
NDEL1-208ENST00000580237 MYMKA6NI61 221 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 GCNT3O95395 438 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 BRD1O95696 1058 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CXCL8P10145 99 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 ASIC1P78348 528 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CREMQ03060 361 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 PPP2R3AQ06190 1150 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 MCL1Q07820 350 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 ELAVL2Q12926 359 aaKnown RBP11.9□□□□□ -0.5
NDEL1-208ENST00000580237 COASYQ13057 564 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 KYAT1Q16773 422 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 USP41Q3LFD5 358 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 SEZ6Q53EL9 994 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 ANKRD54Q6NXT1 300 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 SHC4Q6S5L8 630 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CEP57Q86XR8 500 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CCDC65Q8IXS2 484 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 IQUBQ8NA54 791 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 RIN2Q8WYP3 895 aaPredicted RBP11.9□□□□□ -0.5
NDEL1-208ENST00000580237 HVCN1Q96D96 273 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 MSLNLQ96KJ4 702 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 B3GALT6Q96L58 329 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 UROC1Q96N76 676 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 TNMDQ9H2S6 317 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 TBC1D7Q9P0N9 293 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
NDEL1-208ENST00000580237 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.5
NDEL1-208ENST00000580237 DENND4AQ7Z401 1863 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 SMIM28A0A1B0GU29 152 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 ABLIM1O14639 778 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 B3GAT3O94766 335 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 CLTAP09496 248 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 CNPP09543 421 aaKnown RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 EPCAMP16422 314 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 AMPD3Q01432 767 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 ZC2HC1CQ53FD0 456 aaPredicted RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 FAM171A1Q5VUB5 890 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 STXBP4Q6ZWJ1 553 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 MAP4K3Q8IVH8 894 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 GLYCTKQ8IVS8 523 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 ADHFE1Q8IWW8 467 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 SYCP3Q8IZU3 236 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 GJD3Q8N144 294 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 STAMQ92783 540 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 PYM1Q9BRP8 204 aaKnown RBP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 GPR62Q9BZJ7 368 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 MAGEF1Q9HAY2 307 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
NDEL1-208ENST00000580237 PRKAG3Q9UGI9 489 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 NUB1Q9Y5A7 615 aa11.89□□□□□ -0.51
NDEL1-208ENST00000580237 PODXLO00592 558 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 OGTO15294 1046 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 POLR2DO15514 142 aaKnown RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 XPOTO43592 962 aaKnown RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 TRAPPC3O43617 180 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 GLUD1P00367 558 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 PIGRP01833 764 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms