RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NAP1L3Q99457 506 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PTPRJQ12913 1337 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 TNNI1P19237 187 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 RRM1P23921 792 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 C11orf63Q6NUN7 778 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 SLC13A5Q86YT5 568 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 LPAR1Q92633 364 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 TMEM8AQ9HCN3 771 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 KLHL11Q9NVR0 708 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 ANKFY1Q9P2R3 1169 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 A0A087WUV0 522 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 ZBTB7AO95365 584 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 ACSL3O95573 720 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 RFX1P22670 979 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 SSR1P43307 286 aaKnown RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 IFNAR2P48551 515 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 CDR2Q01850 454 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 SP2Q02086 613 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 PRKCEQ02156 737 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 BIRC3Q13489 604 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 PPP1R7Q15435 360 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 DENND2CQ68D51 928 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 C12orf56Q8IXR9 622 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 CD101Q93033 1021 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 ZBED3Q96IU2 234 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 ZNF668Q96K58 619 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 POLR3FQ9H1D9 316 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-209ENST00000580095 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
TOP3A-209ENST00000580095 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 LYPLA2O95372 231 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 FAM107AO95990 144 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 JAK3P52333 1124 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 KRT76Q01546 638 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 ADCY1Q08828 1119 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 ALCAMQ13740 583 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 NIPA1Q7RTP0 329 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 PABPC3Q9H361 631 aaKnown RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MLXIPLQ9NP71 852 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 DDX20Q9UHI6 824 aaKnown RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 P4HA2O15460 535 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MAPK4P31152 587 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 COILP38432 576 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 SIX1Q15475 284 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 EXOC7Q9UPT5 735 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 R3HDM2Q9Y2K5 976 aaKnown RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 UMODL1Q5DID0 1318 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MEFVO15553 781 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 CYP1A2P05177 515 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 KCNA2P16389 499 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 SCP2P22307 547 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 CTNNA2P26232 953 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 CHRNA3P32297 505 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-209ENST00000580095 GPC3P51654 580 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 ACTR2P61160 394 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 TMEM132BQ14DG7 1078 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 B4GALNT4Q76KP1 1039 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 C11orf70Q9BRQ4 267 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 RASAL2Q9UJF2 1139 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 PCDHA3Q9Y5H8 950 aa11.22□□□□□ -0.61
TOP3A-209ENST00000580095 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 H0YHG0 523 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.61
TOP3A-209ENST00000580095 STBD1O95210 358 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 GZMAP12544 262 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CREB1P16220 341 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CCND2P30279 289 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CHKAP35790 457 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 LIG4P49917 911 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 RWDD2BP57060 319 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 CNTN2Q02246 1040 aa11.21□□□□□ -0.61
TOP3A-209ENST00000580095 DHX34Q14147 1143 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms