RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 CARNS1A5YM72 827 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 ALDH2P05091 517 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 GALTP07902 379 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 CXCL8P10145 99 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 SLC11A1P49279 550 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 ACOT2P49753 483 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 DSC1Q08554 894 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 COLGALT2Q8IYK4 626 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
IFT20-208ENST00000578985 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
IFT20-208ENST00000578985 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 NT5C1B-RDH14C9J2C7 533 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 GRM6O15303 877 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 MEFVO15553 781 aaPredicted RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 LPXNO60711 386 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 FGF18O76093 207 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 ITGB1P05556 798 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 IGFBP4P22692 258 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 PPM1AP35813 382 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 OR1G1P47890 313 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 ADGRE1Q14246 886 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 HS2ST1Q7LGA3 356 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 SLC39A11Q8N1S5 342 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 AGPAT3Q9NRZ7 376 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 CNTN3Q9P232 1028 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
IFT20-208ENST00000578985 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
IFT20-208ENST00000578985 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 KIAA0391O15091 583 aaKnown RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 EXTL3O43909 919 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 KIF20AO95235 890 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 KCNE1P15382 129 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 TUSC3Q13454 348 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 CRELD2Q6UXH1 353 aaPredicted RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 ZSWIM2Q8NEG5 633 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 SPPL3Q8TCT6 385 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 FAM212AQ96EL1 285 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 FAM213AQ9BRX8 229 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 GTPBP4Q9BZE4 634 aaKnown RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 LMAN2LQ9H0V9 348 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
IFT20-208ENST00000578985 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 MYO7AQ13402 2215 aa16.75■□□□□ 0.27
IFT20-208ENST00000578985 GOLGA8IPA6NC78 632 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 GOLGA8JA6NMD2 632 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 NRP1O14786 923 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 CLIC2O15247 247 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 ADRB2P07550 413 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 FOSL2P15408 326 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 KRT17Q04695 432 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 NAB2Q15742 525 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 CAMK4Q16566 473 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 PTPROQ16827 1216 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 ZNF658Q5TYW1 1059 aaPredicted RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 CD302Q8IX05 232 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 GUF1Q8N442 669 aaKnown RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 GOLGA5Q8TBA6 731 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 IGSF21Q96ID5 467 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 COLEC11Q9BWP8 271 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 KCTD10Q9H3F6 313 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 SLC38A7Q9NVC3 462 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 HSPBP1Q9NZL4 362 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 PRG3Q9Y2Y8 225 aaPredicted RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
IFT20-208ENST00000578985 ATG2AQ2TAZ0 1938 aa16.74■□□□□ 0.27
IFT20-208ENST00000578985 CASTOR2A6NHX0 329 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
IFT20-208ENST00000578985 CYP2J2P51589 502 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 UBE3AQ05086 875 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 SPAG1Q07617 926 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
IFT20-208ENST00000578985 C12orf56Q8IXR9 622 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 BCL7CQ8WUZ0 217 aaPredicted RBP16.73■□□□□ 0.27
IFT20-208ENST00000578985 POF1BQ8WVV4 589 aa16.73■□□□□ 0.27
IFT20-208ENST00000578985 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms