RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZSCAN20P17040 1043 aaPredicted RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 DLG4P78352 724 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 PPP3CAQ08209 521 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 NFX1Q12986 1120 aaKnown RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 ENOX2Q16206 610 aaKnown RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 HS1BP3Q53T59 392 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 TRAF7Q6Q0C0 670 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 CDR2LQ86X02 465 aaPredicted RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 NT5DC4Q86YG4 428 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 NEK11Q8NG66 645 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 MMRN2Q9H8L6 949 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 PADI3Q9ULW8 664 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 COQ4Q9Y3A0 265 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 A0A1W2PQJ5 194 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TNNI1P19237 187 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TRIM21P19474 475 aaKnown RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TNFSF9P41273 254 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 FXR1P51114 621 aaKnown RBP eCLIP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 RAB27AP51159 221 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 YARSP54577 528 aaKnown RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TLE2Q04725 743 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 KCNMA1Q12791 1236 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 DUOXA2Q1HG44 320 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CBWD6Q4V339 395 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CBWD3Q5JTY5 395 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CBWD5Q5RIA9 395 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 UBXN11Q5T124 520 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TWF2Q6IBS0 349 aaKnown RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CCDC186Q7Z3E2 898 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CEP120Q8N960 986 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 ZNF397Q8NF99 534 aaPredicted RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TMEM117Q9H0C3 514 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 AGO3Q9H9G7 860 aaKnown RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 PDE11AQ9HCR9 933 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 GCNT4Q9P109 453 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 FBXL5Q9UKA1 691 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 CAPN11Q9UMQ6 739 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 DERAQ9Y315 318 aa14.53□□□□□ -0.08
SRSF1-202ENST00000578430 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.53□□□□□ -0.08
SRSF1-202ENST00000578430 TTC26A0AVF1 554 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 AKR1B15C9JRZ8 316 aaPredicted RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 ZNF623O75123 536 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 CXCL8P10145 99 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 RFX1P22670 979 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 PON1P27169 355 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 CD52P31358 61 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 GCLMP48507 274 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 FAAP100Q0VG06 881 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 DSC3Q14574 896 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 ZACNQ401N2 412 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 TRIM60Q495X7 471 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 EPC2Q52LR7 807 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 SEZ6Q53EL9 994 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 C15orf39Q6ZRI6 1047 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 SV2AQ7L0J3 742 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 EHBP1Q8NDI1 1231 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 DIS3LQ8TF46 1054 aaKnown RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 CACTINQ8WUQ7 758 aaKnown RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 TRIM44Q96DX7 344 aaPredicted RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 PAWRQ96IZ0 340 aaKnown RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 FTHL17Q9BXU8 183 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 EIF2AQ9BY44 585 aaKnown RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 TTYH3Q9C0H2 523 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 NUCKS1Q9H1E3 243 aaKnown RBP14.52□□□□□ -0.09
SRSF1-202ENST00000578430 C2CD2Q9Y426 696 aa14.52□□□□□ -0.09
SRSF1-202ENST00000578430 NRDCO43847 1150 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 ZC3H11AO75152 810 aaKnown RBP eCLIP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 TNNC2P02585 160 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 C4BPAP04003 597 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 GYPCP04921 128 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 OSTNP61366 133 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 ZBED6P86452 979 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 SLC10A6Q3KNW5 377 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 FBXL13Q8NEE6 735 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 APBB2Q92870 758 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 ANKRD36BP1Q96IX9 119 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 FAM81BQ96LP2 452 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 POP1Q99575 1024 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 LSM14BQ9BX40 385 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 INTS2Q9H0H0 1204 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 HIPK3Q9H422 1215 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 FAM207AQ9NSI2 230 aaPredicted RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 FAM105AQ9NUU6 356 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 CEP72Q9P209 647 aa14.51□□□□□ -0.09
SRSF1-202ENST00000578430 COLQQ9Y215 455 aaPredicted RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 LUC7L2Q9Y383 392 aaKnown RBP14.51□□□□□ -0.09
SRSF1-202ENST00000578430 LACTBL1A8MY62 500 aa14.5□□□□□ -0.09
SRSF1-202ENST00000578430 XPOTO43592 962 aaKnown RBP14.5□□□□□ -0.09
SRSF1-202ENST00000578430 MFAP3LO75121 409 aa14.5□□□□□ -0.09
SRSF1-202ENST00000578430 TMEM191BP0C7N4 346 aa14.5□□□□□ -0.09
SRSF1-202ENST00000578430 SLC9A1P19634 815 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms