RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HDAC7Q8WUI4 952 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 SMG7Q92540 1137 aaKnown RBP17.63■□□□□ 0.41
VAPA-204ENST00000577901 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 B3GALT6Q96L58 329 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 IFT74Q96LB3 600 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 USP28Q96RU2 1077 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 PLIN2Q99541 437 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 RTP3Q9BQQ7 232 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
VAPA-204ENST00000577901 CHST7Q9NS84 486 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
VAPA-204ENST00000577901 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
VAPA-204ENST00000577901 CFHP08603 1231 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 AKAP5P24588 427 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 SLC39A14Q15043 492 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 DTWD2Q8NBA8 298 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 ZNF707Q96C28 371 aaPredicted RBP17.62■□□□□ 0.41
VAPA-204ENST00000577901 MYADMQ96S97 322 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 TIPINQ9BVW5 301 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 GPR62Q9BZJ7 368 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 C2orf40Q9H1Z8 148 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 PLEKHA4Q9H4M7 779 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 WNT16Q9UBV4 365 aa17.62■□□□□ 0.41
VAPA-204ENST00000577901 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
VAPA-204ENST00000577901 STK25O00506 426 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 B4GALT5O43286 388 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 TGM5O43548 720 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 PAPLNO95428 1278 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 F13A1P00488 732 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 C1RP00736 705 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 PLA2G4BP0C869 781 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 NAMPTP43490 491 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 GRIN1Q05586 938 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 STK38Q15208 465 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 ANGPT1Q15389 498 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 USP41Q3LFD5 358 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 TMEM119Q4V9L6 283 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 FOXD4L5Q5VV16 416 aaPredicted RBP17.61■□□□□ 0.41
VAPA-204ENST00000577901 RINT1Q6NUQ1 792 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 FUT10Q6P4F1 479 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 KCNK18Q7Z418 384 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 SLC44A3Q8N4M1 653 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 SYT2Q8N9I0 419 aaPredicted RBP17.61■□□□□ 0.41
VAPA-204ENST00000577901 GSTCDQ8NEC7 633 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 DEPTORQ8TB45 409 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 FOXD4L4Q8WXT5 416 aaPredicted RBP17.61■□□□□ 0.41
VAPA-204ENST00000577901 NXPE3Q969Y0 559 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 CCSER1Q9C0I3 900 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 PIDD1Q9HB75 910 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.61■□□□□ 0.414e-10■□□□□ 11.3
VAPA-204ENST00000577901 CCDC39Q9UFE4 941 aa17.61■□□□□ 0.41
VAPA-204ENST00000577901 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
VAPA-204ENST00000577901 KRBA1A5PL33 1030 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 NPTXRO95502 500 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 TXLNAP40222 546 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 GRIK3Q13003 919 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 SLC27A1Q6PCB7 646 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 C1orf186Q6ZWK4 172 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 CDR2LQ86X02 465 aaPredicted RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 GPR65Q8IYL9 337 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 RABGGTAQ92696 567 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 DRC1Q96MC2 740 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 PRMT7Q9NVM4 692 aaPredicted RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 ZDHHC7Q9NXF8 308 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 KCND2Q9NZV8 630 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 KLK14Q9P0G3 267 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 FNIP2Q9P278 1114 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
VAPA-204ENST00000577901 KCNG1Q9UIX4 513 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 ADAM28Q9UKQ2 775 aa17.6■□□□□ 0.41
VAPA-204ENST00000577901 A0A1B0GUA9 196 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 TADA2AO75478 443 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 SRFP11831 508 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 RFX1P22670 979 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 GUCY2CP25092 1073 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 SLC12A3P55017 1021 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 CREMQ03060 361 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 KARSQ15046 597 aaKnown RBP17.59■□□□□ 0.41
VAPA-204ENST00000577901 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
VAPA-204ENST00000577901 LILRA6Q6PI73 481 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 ADSSL1Q8N142 457 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 PRIMPOLQ96LW4 560 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 RUSC1Q9BVN2 902 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 PRKD2Q9BZL6 878 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 C17orf75Q9HAS0 396 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 POLD4Q9HCU8 107 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.59■□□□□ 0.41
VAPA-204ENST00000577901 PARP2Q9UGN5 583 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 CA14Q9ULX7 337 aa17.59■□□□□ 0.41
VAPA-204ENST00000577901 ZMYM2Q9UBW7 1377 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 HIP1RO75146 1068 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 RPL17P18621 184 aaKnown RBP17.58■□□□□ 0.4
VAPA-204ENST00000577901 EFNA5P52803 228 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 DMP1Q13316 513 aaPredicted RBP17.58■□□□□ 0.4
VAPA-204ENST00000577901 MAPK6Q16659 721 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms