RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TSPY26PQ9H489 355 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 AGO3Q9H9G7 860 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 AGPAT3Q9NRZ7 376 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PADI3Q9ULW8 664 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ST3GAL5Q9UNP4 418 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MAPK8IP1Q9UQF2 711 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DMXL1Q9Y485 3027 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ANKRD63C9JTQ0 380 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FAM189A1O60320 539 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NBNO60934 754 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ZNF623O75123 536 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ADRB2P07550 413 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ACTN1P12814 892 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RPL13P26373 211 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MARSP56192 900 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FAM189BP81408 668 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 KYAT1Q16773 422 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SPATA1Q5VX52 437 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NOTUMQ6P988 496 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HS2ST1Q7LGA3 356 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SYCP3Q8IZU3 236 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 APBB2Q92870 758 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SCLYQ96I15 445 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ZNF668Q96K58 619 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 POP1Q99575 1024 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FTHL17Q9BXU8 183 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 OSBPL7Q9BZF2 842 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 KIAA1586Q9HCI6 787 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ZNF292O60281 2723 aa12.16□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 H3BQ06 376 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HNRNPDLO14979 420 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 N4BP3O15049 544 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CLDN3O15551 220 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 B4GALT5O43286 388 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CSDE1O75534 798 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ERLIN2O94905 339 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LDHAP00338 332 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MCF2P10911 925 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LIG4P49917 911 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ERVK-21P61565 698 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MPZL3Q6UWV2 235 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LRRC55Q6ZSA7 311 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DHX40Q8IX18 779 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NELFCDQ8IXH7 590 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NOC3LQ8WTT2 800 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PABPC5Q96DU9 382 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 BORCS6Q96GS4 357 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TSG101Q99816 390 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MKNK1Q9BUB5 465 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PDZD7Q9H5P4 517 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RGS18Q9NS28 235 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FGFR1OPO95684 399 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GNA14O95837 355 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 NR3C1P04150 777 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CTSHP09668 335 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GHRP10912 638 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 AVPR2P30518 371 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 MYL5Q02045 173 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ADAM9Q13443 819 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 UBXN11Q5T124 520 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CRELD2Q6UXH1 353 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 MRPL10Q7Z7H8 261 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 IRF2BP1Q8IU81 584 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CRIPAKQ8N1N5 446 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 PPP1R16BQ96T49 567 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 IKZF4Q9H2S9 585 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 THAP9Q9H5L6 903 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CBX8Q9HC52 389 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 GINS2Q9Y248 185 aa12.14□□□□□ -0.47
CDK5RAP3-204ENST00000577664 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 TRIM49BA6NDI0 452 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 H0Y858 1186 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 CETN3O15182 167 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 OGTO15294 1046 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 SKIP12755 728 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 ZNF18P17022 549 aa12.13□□□□□ -0.47
CDK5RAP3-204ENST00000577664 FGFR4P22455 802 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms