RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 SPPL3Q8TCT6 385 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 HPS3Q969F9 1004 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 TSPAN18Q96SJ8 248 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 FGFBP2Q9BYJ0 223 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 RPF1Q9H9Y2 349 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PLEKHA5Q9HAU0 1116 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 CGNQ9P2M7 1197 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
CDK5RAP3-203ENST00000577442 NCOR1O75376 2440 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ANKRD63C9JTQ0 380 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PTGESO14684 152 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 LDHAP00338 332 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 CXCL8P10145 99 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 KCNE1P15382 129 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PBX3P40426 434 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 OR1G1P47890 313 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 KCNA1Q09470 495 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 KCNB1Q14721 858 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PDE12Q6L8Q7 609 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ARMCX5Q6P1M9 558 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 CD302Q8IX05 232 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GOLGA5Q8TBA6 731 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 UROC1Q96N76 676 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 COLEC11Q9BWP8 271 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 HAPLN2Q9GZV7 340 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 SLC39A2Q9NP94 309 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 TLR9Q9NR96 1032 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 MIOSQ9NXC5 875 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 CNTN3Q9P232 1028 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 DNAJB4Q9UDY4 337 aa13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PRG3Q9Y2Y8 225 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-203ENST00000577442 SMIM28A0A1B0GU29 152 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 NT5C1B-RDH14C9J2C7 533 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 NRP1O14786 923 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 XPOTO43592 962 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 FAM189A1O60320 539 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 B4GALT3O60512 393 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GADD45BO75293 160 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 SLC34A2O95436 690 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ALKAL1Q6UXT8 129 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 PPP1R10Q96QC0 940 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 NGRNQ9NPE2 291 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 CPSF3Q9UKF6 684 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
CDK5RAP3-203ENST00000577442 TTC26A0AVF1 554 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TISP43B9A030 160 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 PRPF40AO75400 957 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ADSSP30520 456 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 STK4Q13043 487 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 PNOCQ13519 176 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ENOX2Q16206 610 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SEZ6Q53EL9 994 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 DDX53Q86TM3 631 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 KIAA0895Q8NCT3 520 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SMARCE1Q969G3 411 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ASB7Q9H672 318 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ENTPD7Q9NQZ7 604 aa13.83□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ANK1P16157 1881 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 EXTL3O43909 919 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 IL18RAPO95256 599 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TNFSF9P41273 254 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ACOT2P49753 483 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 ELAVL2Q12926 359 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SMC1AQ14683 1233 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 NAB2Q15742 525 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TMC7Q7Z402 723 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TMEM173Q86WV6 379 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 BRSK2Q8IWQ3 736 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 GPD1LQ8N335 351 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 KIF12Q96FN5 646 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TCF25Q9BQ70 676 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 CBWD1Q9BRT8 395 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 IKZF4Q9H2S9 585 aa13.82□□□□□ -0.2
CDK5RAP3-203ENST00000577442 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms