RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PLEKHO2Q8TD55 490 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 BAP1Q92560 729 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 OSMRQ99650 979 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 BAG1Q99933 345 aaPredicted RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 KCNF1Q9H3M0 494 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 MMRN2Q9H8L6 949 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 ZNHIT6Q9NWK9 470 aaKnown RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 C2CD2Q9Y426 696 aa13.48□□□□□ -0.25
TSEN54-204ENST00000577197 BZW2Q9Y6E2 419 aaKnown RBP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
TSEN54-204ENST00000577197 CENPFP49454 3210 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 GOLGA8IPA6NC78 632 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 GOLGA8JA6NMD2 632 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 GPR182O15218 404 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 B4GALT5O43286 388 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CCP110O43303 1012 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CLTBP09497 229 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 SKILP12757 684 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 UCHL3P15374 230 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 FAAP100Q0VG06 881 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 EEF1DP3Q658K8 133 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
TSEN54-204ENST00000577197 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
TSEN54-204ENST00000577197 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
TSEN54-204ENST00000577197 FAM207AQ9NSI2 230 aaPredicted RBP13.47□□□□□ -0.25
TSEN54-204ENST00000577197 AIPL1Q9NZN9 384 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
TSEN54-204ENST00000577197 SSU72P8A0A1W2PR75 194 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.25
TSEN54-204ENST00000577197 ACOT2P49753 483 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 RAB27AP51159 221 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 DLG4P78352 724 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 GCNT1Q02742 428 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 ENOX2Q16206 610 aaKnown RBP13.46□□□□□ -0.25
TSEN54-204ENST00000577197 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 CCDC170Q8IYT3 715 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 HACE1Q8IYU2 909 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 ZSWIM2Q8NEG5 633 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 KIAA1524Q8TCG1 905 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.25
TSEN54-204ENST00000577197 TAF4BQ92750 862 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 STK33Q9BYT3 514 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.25
TSEN54-204ENST00000577197 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
TSEN54-204ENST00000577197 RAB20Q9NX57 234 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 TBX21Q9UL17 535 aa13.46□□□□□ -0.25
TSEN54-204ENST00000577197 ANK1P16157 1881 aa13.46□□□□□ -0.26
TSEN54-204ENST00000577197 CITO14578 2027 aa13.46□□□□□ -0.26
TSEN54-204ENST00000577197 ESPNB1AK53 854 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 RPS6KA5O75582 802 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 GFPT2O94808 682 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
TSEN54-204ENST00000577197 CHRNA1P02708 482 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 STAG3L1P0CL83 205 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 CKBP12277 381 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 SKIP12755 728 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 TNNI1P19237 187 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 MSNP26038 577 aaKnown RBP13.45□□□□□ -0.26
TSEN54-204ENST00000577197 THPOP40225 353 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 PRKCIP41743 596 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 GCLMP48507 274 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 ADKP55263 362 aaKnown RBP13.45□□□□□ -0.26
TSEN54-204ENST00000577197 JAM2P57087 298 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 TMEM40Q8WWA1 233 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 RSPH1Q8WYR4 309 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 WNT8BQ93098 351 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 CCDC127Q96BQ5 260 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 ACAP3Q96P50 834 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 PDE11AQ9HCR9 933 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
TSEN54-204ENST00000577197 ATP8B3O60423 1300 aa13.44□□□□□ -0.26
TSEN54-204ENST00000577197 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
TSEN54-204ENST00000577197 KIAA0355O15063 1070 aa13.44□□□□□ -0.26
TSEN54-204ENST00000577197 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
TSEN54-204ENST00000577197 ZNF623O75123 536 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms