RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 NOMO2Q5JPE7 1267 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 CEP135Q66GS9 1140 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 LRRC55Q6ZSA7 311 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.56
NUP88-210ENST00000574867 LRRC43Q8N309 656 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 ZSWIM2Q8NEG5 633 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 TSPAN18Q96SJ8 248 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 GAD1Q99259 594 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 RAD9AQ99638 391 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 DNAJC25Q9H1X3 360 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 ASB7Q9H672 318 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 KANSL3Q9P2N6 904 aa18.58■□□□□ 0.56
NUP88-210ENST00000574867 ANK1P16157 1881 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 TTC26A0AVF1 554 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 SLC16A3O15427 465 aaKnown RBP18.57■□□□□ 0.56
NUP88-210ENST00000574867 TLL1O43897 1013 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 FGFR1OPO95684 399 aaKnown RBP18.57■□□□□ 0.56
NUP88-210ENST00000574867 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 ALKAL1Q6UXT8 129 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 ZFP42Q96MM3 310 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 CASD1Q96PB1 797 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 KLK14Q9P0G3 267 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 INPP5FQ9Y2H2 1132 aa18.57■□□□□ 0.56
NUP88-210ENST00000574867 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.57■□□□□ 0.56
NUP88-210ENST00000574867 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
NUP88-210ENST00000574867 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 TBKBP1A7MCY6 615 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 CAVIN2O95810 425 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 PSMC2P35998 433 aaKnown RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 GRIK3Q13003 919 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 SURF1Q15526 300 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 AKAP3O75969 853 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 EPB41P11171 864 aaKnown RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 KCNE1P15382 129 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 CYP24A1Q07973 514 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 TPD52L1Q16890 204 aaPredicted RBP18.56■□□□□ 0.56
NUP88-210ENST00000574867 RDH13Q8NBN7 331 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 GSTCDQ8NEC7 633 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 MED15Q96RN5 788 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 BPIFA3Q9BQP9 254 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 DERAQ9Y315 318 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 GBF1Q92538 1859 aa18.56■□□□□ 0.56
NUP88-210ENST00000574867 MEFVO15553 781 aaPredicted RBP18.55■□□□□ 0.56
NUP88-210ENST00000574867 CASP4P49662 377 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 GATMP50440 423 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 SCNN1GP51170 649 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 ENPEPQ07075 957 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 INTS8Q75QN2 995 aaKnown RBP18.55■□□□□ 0.56
NUP88-210ENST00000574867 USP37Q86T82 979 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 NT5DC4Q86YG4 428 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 FAM186BQ8IYM0 893 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 ENOX1Q8TC92 643 aaKnown RBP18.55■□□□□ 0.56
NUP88-210ENST00000574867 SP7Q8TDD2 431 aaPredicted RBP18.55■□□□□ 0.56
NUP88-210ENST00000574867 MFSD14AQ96MC6 490 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 C2CD2Q9Y426 696 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 TRIP11Q15643 1979 aa18.55■□□□□ 0.56
NUP88-210ENST00000574867 LACTBL1A8MY62 500 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 PTGESO14684 152 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 THP07101 528 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 PSMD6Q15008 389 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 RAB30Q15771 203 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 SPATA1Q5VX52 437 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 FAM109BQ6ICB4 259 aaPredicted RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 FILIP1Q7Z7B0 1213 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 FAM212AQ96EL1 285 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 SLC38A7Q9NVC3 462 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 SMIM28A0A1B0GU29 152 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 XPOTO43592 962 aaKnown RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 GNA14O95837 355 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 MYL5Q02045 173 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 LRSAM1Q6UWE0 723 aa18.54■□□□□ 0.56
NUP88-210ENST00000574867 PPP1R10Q96QC0 940 aaKnown RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 COLQQ9Y215 455 aaPredicted RBP18.54■□□□□ 0.56
NUP88-210ENST00000574867 POMCP01189 267 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 KRT13P13646 458 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 ZNF445P59923 1031 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 RNASELQ05823 741 aaKnown RBP18.53■□□□□ 0.56
NUP88-210ENST00000574867 GLRA4Q5JXX5 417 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 KIF12Q96FN5 646 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 FNBP1Q96RU3 617 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 SRRTQ9BXP5 876 aaKnown RBP18.53■□□□□ 0.56
NUP88-210ENST00000574867 THAP9Q9H5L6 903 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 METTL14Q9HCE5 456 aaKnown RBP18.53■□□□□ 0.56
NUP88-210ENST00000574867 PDE11AQ9HCR9 933 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 CARNS1A5YM72 827 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 ZNF165P49910 485 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 AFF1P51825 1210 aaKnown RBP18.53■□□□□ 0.56
NUP88-210ENST00000574867 RABGGTBP53611 331 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 TMEM132DQ14C87 1099 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 FAM114A1Q8IWE2 563 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 TMC2Q8TDI7 906 aa18.53■□□□□ 0.56
NUP88-210ENST00000574867 FAM193BQ96PV7 902 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms