RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 GLRA4Q5JXX5 417 aa26.48■■□□□ 1.83
LITAF-213ENST00000574701 GLIS3Q8NEA6 775 aa26.48■■□□□ 1.83
LITAF-213ENST00000574701 RPF1Q9H9Y2 349 aaKnown RBP26.48■■□□□ 1.83
LITAF-213ENST00000574701 PRG3Q9Y2Y8 225 aaPredicted RBP26.48■■□□□ 1.83
LITAF-213ENST00000574701 TRIP11Q15643 1979 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 CDH23Q9H251 3354 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 CXCL8P10145 99 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 EPM2AIP1Q7L775 607 aaPredicted RBP26.47■■□□□ 1.83
LITAF-213ENST00000574701 ZNF507Q8TCN5 953 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 IGSF21Q96ID5 467 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 GBP4Q96PP9 640 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 TLR9Q9NR96 1032 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 SLC38A7Q9NVC3 462 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 CNTN3Q9P232 1028 aa26.47■■□□□ 1.83
LITAF-213ENST00000574701 NRP1O14786 923 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 SLC34A2O95436 690 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 GARTP22102 1010 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 TNFSF9P41273 254 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 ARMCX5Q6P1M9 558 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 PPM1EQ8WY54 764 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 COLEC11Q9BWP8 271 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 IKZF4Q9H2S9 585 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 PLEKHA5Q9HAU0 1116 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 CHD7Q9P2D1 2997 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 STK39Q9UEW8 545 aa26.46■■□□□ 1.83
LITAF-213ENST00000574701 PDCD11Q14690 1871 aaKnown RBP26.46■■□□□ 1.83
LITAF-213ENST00000574701 ATG2AQ2TAZ0 1938 aa26.45■■□□□ 1.83
LITAF-213ENST00000574701 PRPF40AO75400 957 aaKnown RBP26.45■■□□□ 1.82
LITAF-213ENST00000574701 PNOCQ13519 176 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 BMS1Q14692 1282 aaKnown RBP26.45■■□□□ 1.82
LITAF-213ENST00000574701 BMT2Q1RMZ1 405 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 XKR4Q5GH76 650 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 ALKAL1Q6UXT8 129 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 TMEM173Q86WV6 379 aaPredicted RBP26.45■■□□□ 1.82
LITAF-213ENST00000574701 NELFCDQ8IXH7 590 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 MICAL1Q8TDZ2 1067 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 SCFD1Q8WVM8 642 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 PPP2R3CQ969Q6 453 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 PPP1R10Q96QC0 940 aaKnown RBP26.45■■□□□ 1.82
LITAF-213ENST00000574701 CXCL16Q9H2A7 254 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 NSUN3Q9H649 340 aaKnown RBP26.45■■□□□ 1.82
LITAF-213ENST00000574701 ENTPD7Q9NQZ7 604 aa26.45■■□□□ 1.82
LITAF-213ENST00000574701 SMIM28A0A1B0GU29 152 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 CASTOR2A6NHX0 329 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 KIAA0391O15091 583 aaKnown RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 FAM189A1O60320 539 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 RHOBTB3O94955 611 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 KIF20AO95235 890 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 SMC2O95347 1197 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 LDHAP00338 332 aaKnown RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 KCNE1P15382 129 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 KCNB1Q14721 858 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 CCDC85BQ15834 202 aaPredicted RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 SLC10A6Q3KNW5 377 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 ZBTB41Q5SVQ8 909 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 PDE12Q6L8Q7 609 aaKnown RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 HS2ST1Q7LGA3 356 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 KIAA0895Q8NCT3 520 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 RMND1Q9NWS8 449 aa26.44■■□□□ 1.82
LITAF-213ENST00000574701 CPSF3Q9UKF6 684 aaKnown RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 PRRC2BQ5JSZ5 2229 aaKnown RBP26.44■■□□□ 1.82
LITAF-213ENST00000574701 DNAJB1P25685 340 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 ADSSP30520 456 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 ACOT2P49753 483 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 SNRPFP62306 86 aaKnown RBP26.43■■□□□ 1.82
LITAF-213ENST00000574701 STK4Q13043 487 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 ENOX2Q16206 610 aaKnown RBP26.43■■□□□ 1.82
LITAF-213ENST00000574701 CLEC17AQ6ZS10 378 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 DDX53Q86TM3 631 aaKnown RBP26.43■■□□□ 1.82
LITAF-213ENST00000574701 CD302Q8IX05 232 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 FAM212AQ96EL1 285 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 UROC1Q96N76 676 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 TCF25Q9BQ70 676 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 MARCH5Q9NX47 278 aa26.43■■□□□ 1.82
LITAF-213ENST00000574701 XPOTO43592 962 aaKnown RBP26.42■■□□□ 1.82
LITAF-213ENST00000574701 HSP90AA2PQ14568 343 aaPredicted RBP26.42■■□□□ 1.82
LITAF-213ENST00000574701 SKIV2LQ15477 1246 aaKnown RBP26.42■■□□□ 1.82
LITAF-213ENST00000574701 NAB2Q15742 525 aa26.42■■□□□ 1.82
LITAF-213ENST00000574701 NOC3LQ8WTT2 800 aaKnown RBP26.42■■□□□ 1.82
LITAF-213ENST00000574701 BCL7CQ8WUZ0 217 aaPredicted RBP26.42■■□□□ 1.82
LITAF-213ENST00000574701 CBWD1Q9BRT8 395 aa26.42■■□□□ 1.82
LITAF-213ENST00000574701 TTC26A0AVF1 554 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 CA8P35219 290 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 POU5F1Q01860 360 aaKnown RBP26.41■■□□□ 1.82
LITAF-213ENST00000574701 CAMK1Q14012 370 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 KNOP1Q1ED39 458 aaKnown RBP26.41■■□□□ 1.82
LITAF-213ENST00000574701 PLPP4Q5VZY2 271 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 TMC7Q7Z402 723 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 ELOA2Q8IYF1 753 aaPredicted RBP26.41■■□□□ 1.82
LITAF-213ENST00000574701 VPS52Q8N1B4 723 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 GPD1LQ8N335 351 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 SMARCE1Q969G3 411 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 SAAL1Q96ER3 474 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 KIF12Q96FN5 646 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 ZMAT2Q96NC0 199 aaKnown RBP26.41■■□□□ 1.82
LITAF-213ENST00000574701 TSPAN18Q96SJ8 248 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 FAM213AQ9BRX8 229 aa26.41■■□□□ 1.82
LITAF-213ENST00000574701 NGRNQ9NPE2 291 aaKnown RBP26.41■■□□□ 1.82
LITAF-213ENST00000574701 CGNQ9P2M7 1197 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms