RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 SGK1O00141 431 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 MEIS1O00470 390 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 FKBP6O75344 327 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 EYA4O95677 639 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 YWHAGP61981 247 aaKnown RBP eCLIP12.21□□□□□ -0.45
EDC4-207ENST00000573992 PHEXP78562 749 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 GALNTL6Q49A17 601 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 NLRP10Q86W26 655 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 STKLD1Q8NE28 680 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 COA7Q96BR5 231 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 USP20Q9Y2K6 914 aa12.21□□□□□ -0.45
EDC4-207ENST00000573992 USP17L3A6NCW0 530 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 USP17L4A6NCW7 530 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 CCDC166P0CW27 439 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 KITP10721 976 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 CCNFP41002 786 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 CBX3Q13185 183 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 GRM4Q14833 912 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 EYA3Q99504 573 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.46
EDC4-207ENST00000573992 PCMTD2Q9NV79 361 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 PSMC3IPQ9P2W1 217 aaPredicted RBP12.21□□□□□ -0.46
EDC4-207ENST00000573992 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.46
EDC4-207ENST00000573992 CREB1P16220 341 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 KRT4P19013 534 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 CDK7P50613 346 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 BBS9Q3SYG4 887 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ANKRD20A4Q4UJ75 823 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 C1orf228Q6PIY5 440 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 RSAD2Q8WXG1 361 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 COPEO14579 308 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ZBED4O75132 1171 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 LDHBP07195 334 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 CYP2D6P10635 497 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PDIA2Q13087 525 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 RARS2Q5T160 578 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 TRIM67Q6ZTA4 783 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 WDR75Q8IWA0 830 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 TNFRSF25Q93038 417 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 GLT8D2Q9H1C3 349 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 FLT1P17948 1338 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 TCRBV5S4A2TA0A5A2 114 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PDXKO00764 312 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ECHS1P30084 290 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PCYT1AP49585 367 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 CHRNDQ07001 517 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PPP2R5CQ13362 524 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 SLFN12Q8IYM2 578 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ECSITQ9BQ95 431 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 FOXP3Q9BZS1 431 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 KLHL4Q9C0H6 718 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 GINM1Q9NU53 330 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 CHKBQ9Y259 395 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 NR2E1Q9Y466 385 aa12.2□□□□□ -0.46
EDC4-207ENST00000573992 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
EDC4-207ENST00000573992 PGM3O95394 542 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 MLH1P40692 756 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 CYTH1Q15438 398 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 KLHL38Q2WGJ6 581 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 NAT14Q8WUY8 206 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 ALKBH8Q96BT7 664 aaKnown RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 INTS2Q9H0H0 1204 aaKnown RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 CHORDC1Q9UHD1 332 aaPredicted RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 ITGB1BP2Q9UKP3 347 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 ACTL7BQ9Y614 415 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 NPHP3-ACAD11A0A0J9YXS1 232 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 CSF1RP07333 972 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 TUBP50607 506 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 ALDH18A1P54886 795 aaKnown RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 RTP1P59025 263 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 PRR16Q569H4 304 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 MFSD4BQ5TF39 518 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 NCAPG2Q86XI2 1143 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 NKX2-3Q8TAU0 364 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 ZNF75CPQ92670 426 aaPredicted RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 THAP11Q96EK4 314 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 KLF6Q99612 283 aaPredicted RBP12.19□□□□□ -0.46
EDC4-207ENST00000573992 NINJ2Q9NZG7 142 aa12.19□□□□□ -0.46
EDC4-207ENST00000573992 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms