RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	MAPT	P10636	758 aa	Known RBP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	MTHFR	P42898	656 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	CLCN4	P51793	760 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	DSG1	Q02413	1049 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	CREM	Q03060	361 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	ELAVL2	Q12926	359 aa	Known RBP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	SLC39A14	Q15043	492 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	STK38	Q15208	465 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	GLRA4	Q5JXX5	417 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	RARS2	Q5T160	578 aa	Known RBP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	RRAGB	Q5VZM2	374 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	ZPBP2	Q6X784	338 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	TAS1R1	Q7RTX1	841 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	HAUS6	Q7Z4H7	955 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	CEP120	Q8N960	986 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	HASPIN	Q8TF76	798 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	SLC22A17	Q8WUG5	538 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	RPGRIP1	Q96KN7	1286 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	RIPOR3	Q96MK2	946 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	UROC1	Q96N76	676 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	USP28	Q96RU2	1077 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	GPR62	Q9BZJ7	368 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	ADAM7	Q9H2U9	754 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	SFXN1	Q9H9B4	322 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	PTPRH	Q9HD43	1115 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ABR-222	ENST00000573667	SLC38A7	Q9NVC3	462 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	CACNG4	Q9UBN1	327 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	TRAK2	O60296	914 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	LILRB3	O75022	631 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	KIF4A	O95239	1232 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	EFEMP2	O95967	443 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	PROZ	P22891	400 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	LIG4	P49917	911 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	TMEM31	Q5JXX7	168 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	ATAT1	Q5SQI0	421 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	KIAA0319	Q5VV43	1072 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	CCDC73	Q6ZRK6	1079 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	CEP57	Q86XR8	500 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	RNF135	Q8IUD6	432 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	GPR65	Q8IYL9	337 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	RIN2	Q8WYP3	895 aa	Predicted RBP	13.07	□□□□□ -0.32
ABR-222	ENST00000573667	FBXL18	Q96ME1	805 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	CLIC6	Q96NY7	704 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	PPP1R10	Q96QC0	940 aa	Known RBP	13.07	□□□□□ -0.32
ABR-222	ENST00000573667	PAAF1	Q9BRP4	392 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	CHST7	Q9NS84	486 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	NR2E1	Q9Y466	385 aa		13.07	□□□□□ -0.32
ABR-222	ENST00000573667	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.07	□□□□□ -0.32
ABR-222	ENST00000573667	MYO10	Q9HD67	2058 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	BDP1	A6H8Y1	2624 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	SMIM28	A0A1B0GU29	152 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	LOC730098	B7Z3J9	87 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	HNRNPDL	O14979	420 aa	Known RBP	13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TEX28	O15482	410 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TRAPPC3	O43617	180 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	B3GAT3	O94766	335 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	BRD1	O95696	1058 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	GLUD1	P00367	558 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	STAT6	P42226	847 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	CLCNKB	P51801	687 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	ZNF131	P52739	623 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	NAB2	Q15742	525 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	FAM171A1	Q5VUB5	890 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	PDXDC1	Q6P996	788 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	USP49	Q70CQ1	688 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	SV2B	Q7L1I2	683 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	GLYCTK	Q8IVS8	523 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	C12orf76	Q8N812	135 aa	Predicted RBP	13.06	□□□□□ -0.32
ABR-222	ENST00000573667	LRRC15	Q8TF66	581 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	ZBTB45	Q96K62	511 aa	Predicted RBP	13.06	□□□□□ -0.32
ABR-222	ENST00000573667	B3GALT6	Q96L58	329 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TTPAL	Q9BTX7	342 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	CXCL16	Q9H2A7	254 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	RXFP1	Q9HBX9	757 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	MAN1C1	Q9NR34	630 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TSHZ2	Q9NRE2	1034 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	FNIP2	Q9P278	1114 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TBX20	Q9UMR3	447 aa		13.06	□□□□□ -0.32
ABR-222	ENST00000573667	TMEM189-UBE2V1	I3L0A0	370 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	SPTLC2	O15270	562 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	GPR37L1	O60883	481 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	SP100	P23497	879 aa	Predicted RBP	13.05	□□□□□ -0.32
ABR-222	ENST00000573667	NASP	P49321	788 aa	Predicted RBP	13.05	□□□□□ -0.32
ABR-222	ENST00000573667	MCL1	Q07820	350 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	KYAT1	Q16773	422 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.05	□□□□□ -0.32
ABR-222	ENST00000573667	DCLRE1A	Q6PJP8	1040 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	TMC5	Q6UXY8	1006 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	DYM	Q7RTS9	669 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	PALB2	Q86YC2	1186 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	SPRYD3	Q8NCJ5	442 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	LINC00301	Q8NCQ3	95 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.05	□□□□□ -0.32
ABR-222	ENST00000573667	KCNN1	Q92952	543 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	DDX27	Q96GQ7	796 aa	Known RBP	13.05	□□□□□ -0.32
ABR-222	ENST00000573667	SNX27	Q96L92	541 aa		13.05	□□□□□ -0.32
ABR-222	ENST00000573667	POMK	Q9H5K3	350 aa		13.05	□□□□□ -0.32

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