RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 HS2ST1Q7LGA3 356 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 CD302Q8IX05 232 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 NELFCDQ8IXH7 590 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 SLC39A11Q8N1S5 342 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 GOLGA5Q8TBA6 731 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 GUCD1Q96NT3 240 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 FAM193BQ96PV7 902 aaPredicted RBP18.81■□□□□ 0.6
LITAF-212ENST00000573332 PPP1R10Q96QC0 940 aaKnown RBP18.81■□□□□ 0.6
LITAF-212ENST00000573332 CBWD1Q9BRT8 395 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 CXCL16Q9H2A7 254 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 KCTD10Q9H3F6 313 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 PRDM12Q9H4Q4 367 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
LITAF-212ENST00000573332 CHD9Q3L8U1 2897 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 PDXKO00764 312 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
LITAF-212ENST00000573332 ALDH2P05091 517 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 UBE3AQ05086 875 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 TUSC3Q13454 348 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 GPM6BQ13491 265 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 ENOX2Q16206 610 aaKnown RBP18.8■□□□□ 0.6
LITAF-212ENST00000573332 ZBTB41Q5SVQ8 909 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 KLHL23Q8NBE8 558 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 ERCC4Q92889 916 aaPredicted RBP18.8■□□□□ 0.6
LITAF-212ENST00000573332 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
LITAF-212ENST00000573332 LMAN2LQ9H0V9 348 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 RPF1Q9H9Y2 349 aaKnown RBP18.8■□□□□ 0.6
LITAF-212ENST00000573332 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 LMCD1Q9NZU5 365 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 DNAJB4Q9UDY4 337 aa18.8■□□□□ 0.6
LITAF-212ENST00000573332 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.8■□□□□ 0.6
LITAF-212ENST00000573332 EXTL3O43909 919 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 ITGB1P05556 798 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 CXCL8P10145 99 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 SLC11A1P49279 550 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 ACOT2P49753 483 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 GPD1LQ8N335 351 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 SPPL3Q8TCT6 385 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 FBXL18Q96ME1 805 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 ZMAT2Q96NC0 199 aaKnown RBP18.79■□□□□ 0.6
LITAF-212ENST00000573332 CLSTN2Q9H4D0 955 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 ASB7Q9H672 318 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 KIAA1586Q9HCI6 787 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 SLC38A7Q9NVC3 462 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 KIAA1468Q9P260 1216 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 TRAF3IP3Q9Y228 551 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 LZTS1Q9Y250 596 aa18.79■□□□□ 0.6
LITAF-212ENST00000573332 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 RFXAPO00287 272 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 NRP1O14786 923 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 FGF18O76093 207 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 PPP2R3AQ06190 1150 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 MYBPC2Q14324 1141 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 HSP90AA2PQ14568 343 aaPredicted RBP18.78■□□□□ 0.6
LITAF-212ENST00000573332 ZBTB6Q15916 424 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 SLC9A9Q8IVB4 645 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 GPT2Q8TD30 523 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
LITAF-212ENST00000573332 PCIF1Q9H4Z3 704 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 HSPBP1Q9NZL4 362 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 DERAQ9Y315 318 aa18.78■□□□□ 0.6
LITAF-212ENST00000573332 LACTBL1A8MY62 500 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 MBD3O95983 291 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 MCM4P33991 863 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 PBX3P40426 434 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 PPP1R2P41236 205 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 KRT17Q04695 432 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 MORC3Q14149 939 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 ADGRE1Q14246 886 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 CAMK4Q16566 473 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 NFIL3Q16649 462 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 BRSK2Q8IWQ3 736 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 TRIML1Q8N9V2 468 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 ZSWIM2Q8NEG5 633 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 GDPD5Q8WTR4 605 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 IGSF21Q96ID5 467 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 UROC1Q96N76 676 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 FAM213AQ9BRX8 229 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 DMAC2Q9NW81 257 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 STK39Q9UEW8 545 aa18.77■□□□□ 0.6
LITAF-212ENST00000573332 NT5C1B-RDH14C9J2C7 533 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 CLIC2O15247 247 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 GRM6O15303 877 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 IL18RAPO95256 599 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 CYP3A5P20815 502 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 PRCPP42785 496 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 OR1G1P47890 313 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 ZCWPW2Q504Y3 356 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 NT5DC4Q86YG4 428 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 SMYD4Q8IYR2 804 aaPredicted RBP18.76■□□□□ 0.59
LITAF-212ENST00000573332 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 TMEM169Q96HH4 297 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 COLEC11Q9BWP8 271 aa18.76■□□□□ 0.59
LITAF-212ENST00000573332 NUP62CLQ9H1M0 184 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms