RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 EXOC1Q9NV70 894 aa17.65■□□□□ 0.42
LITAF-210ENST00000571976 PRRC2BQ5JSZ5 2229 aaKnown RBP17.65■□□□□ 0.42
LITAF-210ENST00000571976 TDRD15B5MCY1 1934 aaKnown RBP17.64■□□□□ 0.42
LITAF-210ENST00000571976 SMIM28A0A1B0GU29 152 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 TISP43B9A030 160 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 FAM189A1O60320 539 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 RPN1P04843 607 aaKnown RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 KCNE1P15382 129 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 DPYDQ12882 1025 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 SNW1Q13573 536 aaKnown RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 NAB2Q15742 525 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 SLC10A6Q3KNW5 377 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 KMT5BQ4FZB7 885 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 TMEM173Q86WV6 379 aaPredicted RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 MICAL1Q8TDZ2 1067 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 PPP1R10Q96QC0 940 aaKnown RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 IKZF4Q9H2S9 585 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 SLC38A7Q9NVC3 462 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 CNTN3Q9P232 1028 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 AGO2Q9UKV8 859 aaKnown RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 PRG3Q9Y2Y8 225 aaPredicted RBP17.64■□□□□ 0.41
LITAF-210ENST00000571976 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.41
LITAF-210ENST00000571976 EYSQ5T1H1 3165 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 GARTP22102 1010 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 ADSSP30520 456 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 ERVFC1P60507 584 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 GLRA4Q5JXX5 417 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 DDX53Q86TM3 631 aaKnown RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 BCL7CQ8WUZ0 217 aaPredicted RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 PPP2R3CQ969Q6 453 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 TIGD1Q96MW7 591 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 TCF25Q9BQ70 676 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 RPF1Q9H9Y2 349 aaKnown RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 SLC39A2Q9NP94 309 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 NGRNQ9NPE2 291 aaKnown RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 CPSF3Q9UKF6 684 aaKnown RBP17.63■□□□□ 0.41
LITAF-210ENST00000571976 UBE4BO95155 1302 aa17.63■□□□□ 0.41
LITAF-210ENST00000571976 FSCN2O14926 492 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 MEFVO15553 781 aaPredicted RBP17.62■□□□□ 0.41
LITAF-210ENST00000571976 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
LITAF-210ENST00000571976 CSPG5O95196 566 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 CXCL8P10145 99 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 IRS1P35568 1242 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 TNFSF9P41273 254 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 POU5F1Q01860 360 aaKnown RBP17.62■□□□□ 0.41
LITAF-210ENST00000571976 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 TCEAL5Q5H9L2 206 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 ZBTB41Q5SVQ8 909 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 TMC7Q7Z402 723 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 CD302Q8IX05 232 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 UROC1Q96N76 676 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 ZMAT2Q96NC0 199 aaKnown RBP17.62■□□□□ 0.41
LITAF-210ENST00000571976 TSPAN18Q96SJ8 248 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 ENTPD7Q9NQZ7 604 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 MARCH5Q9NX47 278 aa17.62■□□□□ 0.41
LITAF-210ENST00000571976 HOOK1Q9UJC3 728 aaKnown RBP17.62■□□□□ 0.41
LITAF-210ENST00000571976 TTC26A0AVF1 554 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 CASTOR2A6NHX0 329 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 KIAA0391O15091 583 aaKnown RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 RHOBTB3O94955 611 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 LDHAP00338 332 aaKnown RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 ADRB2P07550 413 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 HOXD13P35453 343 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 ACOT2P49753 483 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 UBE2HP62256 183 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 SNRPFP62306 86 aaKnown RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 SKIV2LQ15477 1246 aaKnown RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 ENOX2Q16206 610 aaKnown RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 BMT2Q1RMZ1 405 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 CLEC17AQ6ZS10 378 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 VPS52Q8N1B4 723 aa17.61■□□□□ 0.41
LITAF-210ENST00000571976 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
LITAF-210ENST00000571976 NCK2O43639 380 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 KINO60870 393 aaKnown RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 TADA2AO75478 443 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 STK4Q13043 487 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 SMC1AQ14683 1233 aaKnown RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 KCNB1Q14721 858 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 KNOP1Q1ED39 458 aaKnown RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 ELOA2Q8IYF1 753 aaPredicted RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 MRPL43Q8N983 215 aaKnown RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 KIAA0895Q8NCT3 520 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 RABGGTAQ92696 567 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 DDX27Q96GQ7 796 aaKnown RBP17.6■□□□□ 0.41
LITAF-210ENST00000571976 PAAF1Q9BRP4 392 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 CBWD1Q9BRT8 395 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 ADAM28Q9UKQ2 775 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 CITO14578 2027 aa17.6■□□□□ 0.41
LITAF-210ENST00000571976 LACTBL1A8MY62 500 aa17.59■□□□□ 0.41
LITAF-210ENST00000571976 TGFB1I1O43294 461 aa17.59■□□□□ 0.41
LITAF-210ENST00000571976 PRPF40AO75400 957 aaKnown RBP17.59■□□□□ 0.41
LITAF-210ENST00000571976 EFEMP2O95967 443 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms