RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 UBE3AQ05086 875 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 SPAG1Q07617 926 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 TUSC3Q13454 348 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
CDT1-203ENST00000569140 KYAT1Q16773 422 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 ZBTB41Q5SVQ8 909 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 ARMCX5Q6P1M9 558 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 TMC7Q7Z402 723 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 TMEM173Q86WV6 379 aaPredicted RBP13.97□□□□□ -0.17
CDT1-203ENST00000569140 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
CDT1-203ENST00000569140 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 GSTCDQ8NEC7 633 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 PPP2R3CQ969Q6 453 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 COLEC11Q9BWP8 271 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 PCIF1Q9H4Z3 704 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
CDT1-203ENST00000569140 IGFLR1Q9H665 355 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 HOOK1Q9UJC3 728 aaKnown RBP13.97□□□□□ -0.17
CDT1-203ENST00000569140 PCDHGC5Q9Y5F6 944 aa13.97□□□□□ -0.17
CDT1-203ENST00000569140 A0A0B4J269 797 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 EIF3DO15371 548 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDT1-203ENST00000569140 KLRC4O43908 158 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 KINO60870 393 aaKnown RBP13.96□□□□□ -0.17
CDT1-203ENST00000569140 PRPF40AO75400 957 aaKnown RBP13.96□□□□□ -0.17
CDT1-203ENST00000569140 DSC1Q08554 894 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 PNOCQ13519 176 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 POSTNQ15063 836 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 RBM23Q86U06 439 aaKnown RBP13.96□□□□□ -0.17
CDT1-203ENST00000569140 VPS52Q8N1B4 723 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 BCL7CQ8WUZ0 217 aaPredicted RBP13.96□□□□□ -0.17
CDT1-203ENST00000569140 KCNN1Q92952 543 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 GOLGA2P5Q9HBQ8 144 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
CDT1-203ENST00000569140 UBE4BO95155 1302 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 SMIM28A0A1B0GU29 152 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 GOLGA8IPA6NC78 632 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 GOLGA8JA6NMD2 632 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 F8W810 466 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 TADA2AO75478 443 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
CDT1-203ENST00000569140 ERVFC1P60507 584 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 DPYDQ12882 1025 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 HSP90AA2PQ14568 343 aaPredicted RBP13.95□□□□□ -0.18
CDT1-203ENST00000569140 PAAF1Q9BRP4 392 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 CBWD1Q9BRT8 395 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 CNTN3Q9P232 1028 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 CHD7Q9P2D1 2997 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 LZTS1Q9Y250 596 aa13.95□□□□□ -0.18
CDT1-203ENST00000569140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 LACTBL1A8MY62 500 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 C2CD2LO14523 706 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 SMC2O95347 1197 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 NRIP1P48552 1158 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 UBE2HP62256 183 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 EHHADHQ08426 723 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 PSMD2Q13200 908 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 CAMK1Q14012 370 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 SLC10A6Q3KNW5 377 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 KIAA1841Q6NSI8 718 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 ADGRD2Q7Z7M1 963 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 DDX53Q86TM3 631 aaKnown RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 SCFD1Q8WVM8 642 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 ERCC4Q92889 916 aaPredicted RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 C18orf25Q96B23 403 aaPredicted RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 ZMAT2Q96NC0 199 aaKnown RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 PPP1R10Q96QC0 940 aaKnown RBP13.94□□□□□ -0.18
CDT1-203ENST00000569140 TLE6Q9H808 572 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 MARCH5Q9NX47 278 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 ADAM28Q9UKQ2 775 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
CDT1-203ENST00000569140 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CITO14578 2027 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 PODXLO00592 558 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 PER2O15055 1255 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CLIC2O15247 247 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 KIF4AO95239 1232 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 URODP06132 367 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 GARTP22102 1010 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 ADSSP30520 456 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CYP2J2P51589 502 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 CLCNKBP51801 687 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
CDT1-203ENST00000569140 STK4Q13043 487 aa13.93□□□□□ -0.18
CDT1-203ENST00000569140 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms