RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 UBE4BO95155 1302 aa18.14■□□□□ 0.49
CNEP1R1-210ENST00000568890 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
CNEP1R1-210ENST00000568890 PDXKO00764 312 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 BMPR1AP36894 532 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 DSC1Q08554 894 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 EPC2Q52LR7 807 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 COBLL1Q53SF7 1204 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 SCARA3Q6AZY7 606 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 CBWD2Q8IUF1 395 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 COLGALT2Q8IYK4 626 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 RDH13Q8NBN7 331 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 MED15Q96RN5 788 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 TRAF3IP3Q9Y228 551 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 HACE1Q8IYU2 909 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 LRRC43Q8N309 656 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 ARNTL2Q8WYA1 636 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 CNTN3Q9P232 1028 aa18.13■□□□□ 0.49
CNEP1R1-210ENST00000568890 GALTP07902 379 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 CASP4P49662 377 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 CYP2J2P51589 502 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 BCAR1P56945 870 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 ZBTB6Q15916 424 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 CENPPQ6IPU0 288 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 RBM43Q6ZSC3 357 aaKnown RBP18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 APBB1IPQ7Z5R6 666 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 C18orf25Q96B23 403 aaPredicted RBP18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 GOLGA2P5Q9HBQ8 144 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 KANSL3Q9P2N6 904 aa18.12■□□□□ 0.49
CNEP1R1-210ENST00000568890 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 EXTL3O43909 919 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 LPXNO60711 386 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 ZC3H11AO75152 810 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 MBD3O95983 291 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 THP07101 528 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 KCNE1P15382 129 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 SLC11A1P49279 550 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 RNASELQ05823 741 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 ANKRD40Q6AI12 368 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 C12orf56Q8IXR9 622 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 BCL7CQ8WUZ0 217 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 GZF1Q9H116 711 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 YARSP54577 528 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 HS2ST1Q7LGA3 356 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 GPD1LQ8N335 351 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 KLHL23Q8NBE8 558 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 NOC3LQ8WTT2 800 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 TMEM174Q8WUU8 243 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 FAM212AQ96EL1 285 aa18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 RPF1Q9H9Y2 349 aaKnown RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 TOPORSQ9NS56 1045 aaPredicted RBP18.11■□□□□ 0.49
CNEP1R1-210ENST00000568890 C5orf67F2Z3F1 127 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 DNAJB1P25685 340 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 SNRPFP62306 86 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 CAMK1Q14012 370 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 SPOUT1Q5T280 376 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 URGCPQ8TCY9 931 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 PLEKHO2Q8TD55 490 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 MRPL9Q9BYD2 267 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 PRDM12Q9H4Q4 367 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 PLEKHA5Q9HAU0 1116 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 PDE11AQ9HCR9 933 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 ALG13Q9NP73 1137 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 NRP1O14786 923 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 NR3C1P04150 777 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 ITGB1P05556 798 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 GUCY2FP51841 1108 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 GRIK3Q13003 919 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 JADE1Q6IE81 842 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 GPR153Q6NV75 609 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 SLC9A9Q8IVB4 645 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 XXYLT1Q8NBI6 393 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 RPS6KC1Q96S38 1066 aa18.1■□□□□ 0.49
CNEP1R1-210ENST00000568890 MYO7AQ13402 2215 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 CASTOR2A6NHX0 329 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 LDHAP00338 332 aaKnown RBP18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 ALDH2P05091 517 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 NFICP08651 508 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 CTNNB1P35222 781 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 DPCR1Q3MIW9 517 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 CD300LGQ6UXG3 332 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 EFCAB13Q8IY85 973 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 TRIML1Q8N9V2 468 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 POP1Q99575 1024 aaKnown RBP18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 TUBGCP4Q9UGJ1 667 aa18.09■□□□□ 0.49
CNEP1R1-210ENST00000568890 PTPRJQ12913 1337 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms