RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 PABPC1LQ4VXU2 614 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 HAS1Q92839 578 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 DYDC2Q96IM9 177 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 NAP1L4Q99733 375 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 PRMT8Q9NR22 394 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 GMEB2Q9UKD1 530 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 MRPS17Q9Y2R5 130 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 ADAM12O43184 909 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 GLRA2P23416 452 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 ARL2P36404 184 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 ZNF852Q6ZMS4 543 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 CDR2LQ86X02 465 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 MRPS23Q9Y3D9 190 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-209ENST00000568569 ECI2O75521 394 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 SLITRK3O94933 977 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 TGM1P22735 817 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 RAB33AQ14088 237 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 ING5Q8WYH8 240 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 PRIMPOLQ96LW4 560 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 ANKEF1Q9NU02 776 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 HCFC1R1Q9NWW0 138 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 GDE1Q9NZC3 331 aa13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 DNMT3BQ9UBC3 853 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-209ENST00000568569 COL4A3Q01955 1670 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 MIA3Q5JRA6 1907 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 MTCL1Q9Y4B5 1905 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 DCDC2BA2VCK2 349 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 PTGESO14684 152 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 LYPLA2O95372 231 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 THP07101 528 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 RARRES1P49788 294 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 MTAPQ13126 283 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 EIF2AK1Q9BQI3 630 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 IER2Q9BTL4 223 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 POLR3FQ9H1D9 316 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 HEBP1Q9NRV9 189 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 F5P12259 2224 aa13.06□□□□□ -0.32
GTF3C1-209ENST00000568569 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 LRRIQ4A6NIV6 560 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 N4BP3O15049 544 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 RECQL4O94761 1208 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 RHOP08100 348 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 ADRB1P08588 477 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 XBP1P17861 261 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 OR1D2P34982 312 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 NRLP54845 237 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 FZD5Q13467 585 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 ELSPBP1Q96BH3 223 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 PARD6AQ9NPB6 346 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 AVENQ9NQS1 362 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 TDRD15B5MCY1 1934 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-209ENST00000568569 MAP1BP46821 2468 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 B3GAT3O94766 335 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 FGFR3P22607 806 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 NAB2Q15742 525 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 LAIR1Q6GTX8 287 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 ZBTB8OSQ8IWT0 167 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms