RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 NT5C3AQ9H0P0 336 aa20.79■□□□□ 0.92
SPSB3-210ENST00000568416 CDT1Q9H211 546 aa20.79■□□□□ 0.92
SPSB3-210ENST00000568416 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
SPSB3-210ENST00000568416 PTPRHQ9HD43 1115 aa20.79■□□□□ 0.92
SPSB3-210ENST00000568416 ZDHHC7Q9NXF8 308 aa20.79■□□□□ 0.92
SPSB3-210ENST00000568416 CLUHO75153 1309 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 TMEM189-UBE2V1I3L0A0 370 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 GUCY2CP25092 1073 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 GRM5P41594 1212 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 PTPN5P54829 565 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 TCF15Q12870 199 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 ELAVL2Q12926 359 aaKnown RBP20.78■□□□□ 0.92
SPSB3-210ENST00000568416 DMP1Q13316 513 aaPredicted RBP20.78■□□□□ 0.92
SPSB3-210ENST00000568416 GLRA4Q5JXX5 417 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 KCTD17Q8N5Z5 321 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 CEP120Q8N960 986 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 CLSTN3Q9BQT9 956 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 TIPINQ9BVW5 301 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 UPF2Q9HAU5 1272 aaKnown RBP20.78■□□□□ 0.92
SPSB3-210ENST00000568416 KMT5AQ9NQR1 393 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
SPSB3-210ENST00000568416 ZNF318Q5VUA4 2279 aa20.78■□□□□ 0.92
SPSB3-210ENST00000568416 KMT2EQ8IZD2 1858 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 H3BQV1 296 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 MCM2P49736 904 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 TDGQ13569 410 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 PSMD5Q16401 504 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 XKR4Q5GH76 650 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 CEP57Q86XR8 500 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 STAMQ92783 540 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 NTPCRQ9BSD7 190 aaKnown RBP20.77■□□□□ 0.92
SPSB3-210ENST00000568416 TARS2Q9BW92 718 aaKnown RBP20.77■□□□□ 0.92
SPSB3-210ENST00000568416 MRPL4Q9BYD3 311 aaKnown RBP20.77■□□□□ 0.92
SPSB3-210ENST00000568416 PRKD2Q9BZL6 878 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 KCNK12Q9HB15 430 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 FBXW11Q9UKB1 542 aa20.77■□□□□ 0.92
SPSB3-210ENST00000568416 ABLIM1O14639 778 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 ZMYND10O75800 440 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 PROZP22891 400 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 IGFBP6P24592 240 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-210ENST00000568416 MRE11P49959 708 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 ZNF568Q3ZCX4 644 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
SPSB3-210ENST00000568416 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 ALKAL1Q6UXT8 129 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-210ENST00000568416 SYT2Q8N9I0 419 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-210ENST00000568416 UROC1Q96N76 676 aa20.76■□□□□ 0.91
SPSB3-210ENST00000568416 SMIM28A0A1B0GU29 152 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 VWA3AA6NCI4 1184 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 SFI1A8K8P3 1242 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 MCF2P10911 925 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 FGFR3P22607 806 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 GBP2P32456 591 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-210ENST00000568416 CLCNKBP51801 687 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 NUBP1P53384 320 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 YARSP54577 528 aaKnown RBP20.75■□□□□ 0.91
SPSB3-210ENST00000568416 ZRSR1Q15695 479 aaKnown RBP20.75■□□□□ 0.91
SPSB3-210ENST00000568416 UPP1Q16831 310 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 PDXDC1Q6P996 788 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 DCLRE1AQ6PJP8 1040 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 SPIRE2Q8WWL2 714 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 MYADMQ96S97 322 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 CCDC94Q9BW85 323 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-210ENST00000568416 PIDD1Q9HB75 910 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-210ENST00000568416 IGSF9Q9P2J2 1179 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 EPS15L1Q9UBC2 864 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 DUSP12Q9UNI6 340 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 SMC3Q9UQE7 1217 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 C2orf16Q68DN1 1984 aa20.75■□□□□ 0.91
SPSB3-210ENST00000568416 SLC16A4O15374 487 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 ADAM12O43184 909 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 B3GAT3O94766 335 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 SLC12A3P55017 1021 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 OSTNP61366 133 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 SOX4Q06945 474 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-210ENST00000568416 TMEM119Q4V9L6 283 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 MPZL3Q6UWV2 235 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 PLIN2Q99541 437 aa20.74■□□□□ 0.91
SPSB3-210ENST00000568416 PLS3P13797 630 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 RAD51AP2Q09MP3 1159 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 RAB33AQ14088 237 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 TMEM105Q8N8V8 129 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 C3orf58Q8NDZ4 430 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 TMEM161BQ8NDZ6 487 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 SNX27Q96L92 541 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 ZMAT2Q96NC0 199 aaKnown RBP20.73■□□□□ 0.91
SPSB3-210ENST00000568416 PHOX2BQ99453 314 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 KCND2Q9NZV8 630 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 MTRRQ9UBK8 725 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 KCNG1Q9UIX4 513 aa20.73■□□□□ 0.91
SPSB3-210ENST00000568416 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-210ENST00000568416 MEFVO15553 781 aaPredicted RBP20.72■□□□□ 0.91
SPSB3-210ENST00000568416 HNRNPA1P09651 372 aaKnown RBP eCLIP20.72■□□□□ 0.91
SPSB3-210ENST00000568416 PLA2G4BP0C869 781 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 KCNE1P15382 129 aa20.72■□□□□ 0.91
SPSB3-210ENST00000568416 HOXA9P31269 272 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms