RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CREMQ03060 361 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 MAPK7Q13164 816 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 ZRSR1Q15695 479 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 USP41Q3LFD5 358 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 TMEM119Q4V9L6 283 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 RARS2Q5T160 578 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KIAA0319Q5VV43 1072 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KIAA1841Q6NSI8 718 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 FUT10Q6P4F1 479 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 ELMSAN1Q6PJG2 1045 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 TAS1R1Q7RTX1 841 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KCNK18Q7Z418 384 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 CABP7Q86V35 215 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 GPR65Q8IYL9 337 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SPIRE2Q8WWL2 714 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 EDAQ92838 391 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 INTS4Q96HW7 963 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 RPGRIP1Q96KN7 1286 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 FBXL18Q96ME1 805 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KLHL5Q96PQ7 755 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 PNMA5Q96PV4 448 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 ACO2Q99798 780 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 NTPCRQ9BSD7 190 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 RUSC1Q9BVN2 902 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 APOL5Q9BWW9 433 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 MRPL4Q9BYD3 311 aaKnown RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 POMKQ9H5K3 350 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SFXN1Q9H9B4 322 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 RXFP1Q9HBX9 757 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SLC24A3Q9HC58 644 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 POLD4Q9HCU8 107 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLK3-219ENST00000567805 CHST7Q9NS84 486 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 SNTG2Q9NY99 539 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 DPP7Q9UHL4 492 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 TNFSF13BQ9Y275 285 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 ARIH1Q9Y4X5 557 aaPredicted RBP5.26□□□□□ -1.57
CLK3-219ENST00000567805 MYO10Q9HD67 2058 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 KMT2EQ8IZD2 1858 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 USP34Q70CQ2 3546 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
CLK3-219ENST00000567805 DMDP11532 3685 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CASTOR2A6NHX0 329 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 F8W810 466 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 H0YCG3 227 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TMEM189-UBE2V1I3L0A0 370 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 SLC16A4O15374 487 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TEX28O15482 410 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TADA2AO75478 443 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 KIF4AO95239 1232 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 GLUD1P00367 558 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 MCF2P10911 925 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 PLS3P13797 630 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 SCP2P22307 547 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 PROZP22891 400 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 GRM5P41594 1212 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 YARSP54577 528 aaKnown RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 RAD51AP2Q09MP3 1159 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 ELAVL2Q12926 359 aaKnown RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 STRN3Q13033 797 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 SF3A1Q15459 793 aaKnown RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 NAB2Q15742 525 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 ZNF568Q3ZCX4 644 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 ARSHQ5FYA8 562 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 EEF1DP3Q658K8 133 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 MPZL3Q6UWV2 235 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TMC5Q6UXY8 1006 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CYP26C1Q6V0L0 522 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 C15orf39Q6ZRI6 1047 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TAS1R3Q7RTX0 852 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 GPR149Q86SP6 731 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 C12orf76Q8N812 135 aaPredicted RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 TMEM161BQ8NDZ6 487 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CMASQ8NFW8 434 aaPredicted RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 HDAC7Q8WUI4 952 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 KCNN1Q92952 543 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CALML4Q96GE6 196 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 UROC1Q96N76 676 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 PPP1R10Q96QC0 940 aaKnown RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 PAAF1Q9BRP4 392 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CCDC94Q9BW85 323 aaPredicted RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 RHOBTB2Q9BYZ6 727 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 GPR62Q9BZJ7 368 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CCSER1Q9C0I3 900 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 CDT1Q9H211 546 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 PTPRHQ9HD43 1115 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 MAN1C1Q9NR34 630 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TOPORSQ9NS56 1045 aaPredicted RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 FNIP2Q9P278 1114 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 LARSQ9P2J5 1176 aaKnown RBP5.25□□□□□ -1.57
CLK3-219ENST00000567805 CACNG4Q9UBN1 327 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 RAPGEFL1Q9UHV5 662 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 ODF2LQ9ULJ1 636 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 LHX6Q9UPM6 363 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms