RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 DNAJB4Q9UDY4 337 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 STXBP5LQ9Y2K9 1186 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 FAN1Q9Y2M0 1017 aa28.49■■■□□ 2.15
NME3-209ENST00000566600 FAM189A1O60320 539 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 LDHAP00338 332 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 ADSSP30520 456 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 TUSC3Q13454 348 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 SEZ6Q53EL9 994 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 HS2ST1Q7LGA3 356 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 SPPL3Q8TCT6 385 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 TMEM169Q96HH4 297 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 GSDMAQ96QA5 445 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 GTPBP4Q9BZE4 634 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 IKZF4Q9H2S9 585 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 RPF1Q9H9Y2 349 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 ALG13Q9NP73 1137 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 SLC38A7Q9NVC3 462 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 CNTN3Q9P232 1028 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 CGNQ9P2M7 1197 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 PUF60Q9UHX1 559 aaKnown RBP28.48■■■□□ 2.15
NME3-209ENST00000566600 LZTS1Q9Y250 596 aa28.48■■■□□ 2.15
NME3-209ENST00000566600 SMIM28A0A1B0GU29 152 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 GRM6O15303 877 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 KCNE1P15382 129 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 HOXD13P35453 343 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 PBX3P40426 434 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 SLC11A1P49279 550 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 KNOP1Q1ED39 458 aaKnown RBP28.47■■■□□ 2.15
NME3-209ENST00000566600 SLC10A6Q3KNW5 377 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 ARMCX5Q6P1M9 558 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 CD302Q8IX05 232 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 KIAA0895Q8NCT3 520 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 SMARCE1Q969G3 411 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 MRPL38Q96DV4 380 aaKnown RBP28.47■■■□□ 2.15
NME3-209ENST00000566600 TSPAN18Q96SJ8 248 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 STK39Q9UEW8 545 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 CPSF3Q9UKF6 684 aaKnown RBP28.47■■■□□ 2.15
NME3-209ENST00000566600 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.47■■■□□ 2.15
NME3-209ENST00000566600 CITO14578 2027 aa28.47■■■□□ 2.15
NME3-209ENST00000566600 B4GALT3O60512 393 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 CXCL8P10145 99 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 TNFSF9P41273 254 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 OR1G1P47890 313 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 PPP2R3AQ06190 1150 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 NELFCDQ8IXH7 590 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 GOLGA5Q8TBA6 731 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 IGSF21Q96ID5 467 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 PPP1R10Q96QC0 940 aaKnown RBP28.46■■■□□ 2.15
NME3-209ENST00000566600 MTCH2Q9Y6C9 303 aa28.46■■■□□ 2.15
NME3-209ENST00000566600 TTC26A0AVF1 554 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 NT5C1B-RDH14C9J2C7 533 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 NRP1O14786 923 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 HSP90AA2PQ14568 343 aaPredicted RBP28.45■■■□□ 2.14
NME3-209ENST00000566600 ENOX2Q16206 610 aaKnown RBP28.45■■■□□ 2.14
NME3-209ENST00000566600 GLRA4Q5JXX5 417 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 SPATA20Q8TB22 786 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 COLEC11Q9BWP8 271 aa28.45■■■□□ 2.14
NME3-209ENST00000566600 ADRB2P07550 413 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 ACOT2P49753 483 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 NAB2Q15742 525 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 ZBTB41Q5SVQ8 909 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 POF1BQ8WVV4 589 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 UROC1Q96N76 676 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 CBWD1Q9BRT8 395 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 CXCL16Q9H2A7 254 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 PCDHA5Q9Y5H7 936 aa28.44■■■□□ 2.14
NME3-209ENST00000566600 TGFB1I1O43294 461 aa28.43■■■□□ 2.14
NME3-209ENST00000566600 EXTL3O43909 919 aa28.43■■■□□ 2.14
NME3-209ENST00000566600 PDE12Q6L8Q7 609 aaKnown RBP28.43■■■□□ 2.14
NME3-209ENST00000566600 KIAA1586Q9HCI6 787 aa28.43■■■□□ 2.14
NME3-209ENST00000566600 AGPAT3Q9NRZ7 376 aa28.43■■■□□ 2.14
NME3-209ENST00000566600 LMBRD1Q9NUN5 540 aa28.43■■■□□ 2.14
NME3-209ENST00000566600 CDH23Q9H251 3354 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 TIGD5Q53EQ6 642 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 DDX53Q86TM3 631 aaKnown RBP28.42■■■□□ 2.14
NME3-209ENST00000566600 GPD1LQ8N335 351 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 ZMAT2Q96NC0 199 aaKnown RBP28.42■■■□□ 2.14
NME3-209ENST00000566600 FAM213AQ9BRX8 229 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 PCIF1Q9H4Z3 704 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 ASB7Q9H672 318 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 TLR9Q9NR96 1032 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 PRG3Q9Y2Y8 225 aaPredicted RBP28.42■■■□□ 2.14
NME3-209ENST00000566600 TRIP11Q15643 1979 aa28.42■■■□□ 2.14
NME3-209ENST00000566600 PLXNA4Q9HCM2 1894 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 LACTBL1A8MY62 500 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 MEFVO15553 781 aaPredicted RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 XPOTO43592 962 aaKnown RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 IL18RAPO95256 599 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 BMS1Q14692 1282 aaKnown RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 CRELD2Q6UXH1 353 aaPredicted RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 C12orf56Q8IXR9 622 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 GUF1Q8N442 669 aaKnown RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 SAAL1Q96ER3 474 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 DDX27Q96GQ7 796 aaKnown RBP28.41■■■□□ 2.14
NME3-209ENST00000566600 HSPBP1Q9NZL4 362 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 DERAQ9Y315 318 aa28.41■■■□□ 2.14
NME3-209ENST00000566600 CASTOR2A6NHX0 329 aa28.4■■■□□ 2.14
NME3-209ENST00000566600 PDXKO00764 312 aa28.4■■■□□ 2.14
NME3-209ENST00000566600 DNAJB1P25685 340 aa28.4■■■□□ 2.14
NME3-209ENST00000566600 ZNF658Q5TYW1 1059 aaPredicted RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms