RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FOXJ2Q9P0K8 574 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 TMPRSS11EQ9UL52 423 aa3.44□□□□□ -1.86
SMG1-212ENST00000566328 LRRC3CA6NJW4 275 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 CXorf49A8MYA2 514 aaPredicted RBP3.43□□□□□ -1.86
SMG1-212ENST00000566328 TMEM127O75204 238 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 C1QL1O75973 258 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 ZFPL1O95159 310 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 ZNF81P51508 661 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 MANFP55145 182 aaKnown RBP3.43□□□□□ -1.86
SMG1-212ENST00000566328 CXADRP78310 365 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 SQSTM1Q13501 440 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 TERF2Q15554 542 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 MFSD14BQ5SR56 506 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 AKNAD1Q5T1N1 836 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 B3GNTL1Q67FW5 361 aaPredicted RBP3.43□□□□□ -1.86
SMG1-212ENST00000566328 PTF1AQ7RTS3 328 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 GRASPQ7Z6J2 395 aaPredicted RBP3.43□□□□□ -1.86
SMG1-212ENST00000566328 COLGALT2Q8IYK4 626 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 SMC1BQ8NDV3 1235 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 SLC35B2Q8TB61 432 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 PTCD3Q96EY7 689 aaKnown RBP3.43□□□□□ -1.86
SMG1-212ENST00000566328 AIFM2Q9BRQ8 373 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 C1QTNF7Q9BXJ2 289 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 OSBPL2Q9H1P3 480 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 KLK15Q9H2R5 256 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMG1-212ENST00000566328 KCNE5Q9UJ90 142 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 PPP2R3BQ9Y5P8 575 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 CDY2AQ9Y6F7 541 aa3.43□□□□□ -1.86
SMG1-212ENST00000566328 COL3A1P02461 1466 aaPredicted RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 SETD1BQ9UPS6 1966 aaKnown RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 ZNF891A8MT65 544 aaPredicted RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 KDM1AO60341 852 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 ASMTLO95671 621 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 GPANK1O95872 356 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 ELANEP08246 267 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 OCA2Q04671 838 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 SF3A1Q15459 793 aaKnown RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 ZNF572Q7Z3I7 529 aaPredicted RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 C1QL2Q7Z5L3 287 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 LYSMD2Q8IV50 215 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 SLC41A1Q8IVJ1 513 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 AHI1Q8N157 1196 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 MRFAP1L1Q96HT8 127 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 UROC1Q96N76 676 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 MOCS1Q9NZB8 636 aa3.42□□□□□ -1.86
SMG1-212ENST00000566328 CDK11AQ9UQ88 783 aaPredicted RBP3.42□□□□□ -1.86
SMG1-212ENST00000566328 CCDC151A5D8V7 595 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 MGST3O14880 152 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 PEX1O43933 1283 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 POMCP01189 267 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 GCSHP23434 173 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 LSSP48449 732 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 LGALS4P56470 323 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 RAP2BP61225 183 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 TRIM25Q14258 630 aaKnown RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 TCEA2Q15560 299 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 LRRTM3Q86VH5 581 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 PPM1KQ8N3J5 372 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 SH2D3CQ8N5H7 860 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 ZNF366Q8N895 744 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 SH3TC2Q8TF17 1288 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 GPR101Q96P66 508 aaPredicted RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 BCO1Q9HAY6 547 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 TMEM260Q9NX78 707 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 FAM30AQ9NZY2 134 aa3.41□□□□□ -1.86
SMG1-212ENST00000566328 ARPP21Q9UBL0 812 aaPredicted RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 MTO1Q9Y2Z2 717 aaKnown RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 NOC2LQ9Y3T9 749 aaKnown RBP3.41□□□□□ -1.86
SMG1-212ENST00000566328 AKR1B10O60218 316 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 ERN1O75460 977 aaKnown RBP3.4□□□□□ -1.87
SMG1-212ENST00000566328 IL2RBP14784 551 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 GPD1P21695 349 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 FGFR4P22455 802 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 CANXP27824 592 aaKnown RBP3.4□□□□□ -1.87
SMG1-212ENST00000566328 SOX10P56693 466 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 IL2P60568 153 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 HSD11B2P80365 405 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 SP140Q13342 867 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 MST1LQ2TV78 715 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 PITRM1Q5JRX3 1037 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 ZNF788Q6ZQV5 615 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 RASSF3Q86WH2 238 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 LNX2Q8N448 690 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 C9orf106Q8NAJ2 232 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 OR7D4Q8NG98 312 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 OR2W6PQ8NHA6 318 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 TIMP4Q99727 224 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 ZSWIM1Q9BR11 485 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 MRI1Q9BV20 369 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 KCTD10Q9H3F6 313 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 UNKLQ9H9P5 680 aaKnown RBP3.4□□□□□ -1.87
SMG1-212ENST00000566328 SPTLC3Q9NUV7 552 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 ASB6Q9NWX5 421 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 KCTD5Q9NXV2 234 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 PNPLA7Q6ZV29 1317 aa3.4□□□□□ -1.87
SMG1-212ENST00000566328 LCHNA4D1U4 455 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 CGB1A6NKQ9 187 aa3.39□□□□□ -1.87
SMG1-212ENST00000566328 ADCY6O43306 1168 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms