RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 HYIQ5T013 277 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 FAM171A1Q5VUB5 890 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 ALYREFQ86V81 257 aaKnown RBP20.14■□□□□ 0.81
USB1-213ENST00000566292 CEP120Q8N960 986 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 DRC1Q96MC2 740 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 PPP1R10Q96QC0 940 aaKnown RBP20.14■□□□□ 0.81
USB1-213ENST00000566292 TTPALQ9BTX7 342 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 CDT1Q9H211 546 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 PLEKHA4Q9H4M7 779 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 TMEM134Q9H6X4 195 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 PTPRHQ9HD43 1115 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 WDR6Q9NNW5 1121 aaKnown RBP20.14■□□□□ 0.81
USB1-213ENST00000566292 DPP7Q9UHL4 492 aa20.14■□□□□ 0.81
USB1-213ENST00000566292 CLUHO75153 1309 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 H3BQV1 296 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 AVPR2P30518 371 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 CREMQ03060 361 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
USB1-213ENST00000566292 ELMSAN1Q6PJG2 1045 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 CYP26C1Q6V0L0 522 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 CEP57Q86XR8 500 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 LNX1Q8TBB1 728 aaPredicted RBP20.13■□□□□ 0.81
USB1-213ENST00000566292 PIK3R5Q8WYR1 880 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 SMG7Q92540 1137 aaKnown RBP20.13■□□□□ 0.81
USB1-213ENST00000566292 CLSTN3Q9BQT9 956 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 NT5C3AQ9H0P0 336 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 KMT5AQ9NQR1 393 aa20.13■□□□□ 0.81
USB1-213ENST00000566292 DAXXQ9UER7 740 aaPredicted RBP20.13■□□□□ 0.81
USB1-213ENST00000566292 VWA3AA6NCI4 1184 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 GRM5P41594 1212 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 TCF15Q12870 199 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 CD300LGQ6UXG3 332 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 TBC1D32Q96NH3 1257 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 PLIN2Q99541 437 aa20.12■□□□□ 0.81
USB1-213ENST00000566292 TARS2Q9BW92 718 aaKnown RBP20.12■□□□□ 0.81
USB1-213ENST00000566292 MRPL4Q9BYD3 311 aaKnown RBP20.12■□□□□ 0.81
USB1-213ENST00000566292 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
USB1-213ENST00000566292 ABLIM1O14639 778 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 SLC16A4O15374 487 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 PROZP22891 400 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 GUCY2CP25092 1073 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 MCM2P49736 904 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 CLCNKBP51801 687 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 RAD51AP2Q09MP3 1159 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 PSMD5Q16401 504 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 ZNF568Q3ZCX4 644 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 ALKAL1Q6UXT8 129 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 APBB1IPQ7Z5R6 666 aaPredicted RBP20.11■□□□□ 0.81
USB1-213ENST00000566292 SYT2Q8N9I0 419 aaPredicted RBP20.11■□□□□ 0.81
USB1-213ENST00000566292 C17orf75Q9HAS0 396 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 KCNK12Q9HB15 430 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 GOLGA2P5Q9HBQ8 144 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 ZDHHC7Q9NXF8 308 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 FBXW11Q9UKB1 542 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
USB1-213ENST00000566292 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
USB1-213ENST00000566292 CACNA1HO95180 2353 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 SMIM28A0A1B0GU29 152 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 TMEM189-UBE2V1I3L0A0 370 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 ADAM12O43184 909 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 ZMYND10O75800 440 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 MRE11P49959 708 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 SLC12A3P55017 1021 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 OSTNP61366 133 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 SOX4Q06945 474 aaPredicted RBP20.1■□□□□ 0.81
USB1-213ENST00000566292 ELAVL2Q12926 359 aaKnown RBP20.1■□□□□ 0.81
USB1-213ENST00000566292 UPP1Q16831 310 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 TMEM119Q4V9L6 283 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 XKR4Q5GH76 650 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 ARL6IP4Q66PJ3 421 aaKnown RBP20.1■□□□□ 0.81
USB1-213ENST00000566292 MYADMQ96S97 322 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 PHOX2BQ99453 314 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 PRRX2Q99811 253 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 NTPCRQ9BSD7 190 aaKnown RBP20.1■□□□□ 0.81
USB1-213ENST00000566292 TIPINQ9BVW5 301 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 CCDC94Q9BW85 323 aaPredicted RBP20.1■□□□□ 0.81
USB1-213ENST00000566292 PRKD2Q9BZL6 878 aa20.1■□□□□ 0.81
USB1-213ENST00000566292 B3GAT3O94766 335 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 FGFR3P22607 806 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 GBP2P32456 591 aaPredicted RBP20.09■□□□□ 0.81
USB1-213ENST00000566292 PTPN5P54829 565 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 TDGQ13569 410 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 DCLRE1AQ6PJP8 1040 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.09■□□□□ 0.81
USB1-213ENST00000566292 KCTD17Q8N5Z5 321 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 C3orf58Q8NDZ4 430 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 SPIRE2Q8WWL2 714 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 STAMQ92783 540 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 ZBTB45Q96K62 511 aaPredicted RBP20.09■□□□□ 0.81
USB1-213ENST00000566292 ZMAT2Q96NC0 199 aaKnown RBP20.09■□□□□ 0.81
USB1-213ENST00000566292 PIDD1Q9HB75 910 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 NOTCH4Q99466 2003 aa20.09■□□□□ 0.81
USB1-213ENST00000566292 NPHP3-ACAD11A0A0J9YXS1 232 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 MEFVO15553 781 aaPredicted RBP20.08■□□□□ 0.81
USB1-213ENST00000566292 PLA2G4BP0C869 781 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 MCF2P10911 925 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 PLS3P13797 630 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 YARSP54577 528 aaKnown RBP20.08■□□□□ 0.81
USB1-213ENST00000566292 LARP1BQ659C4 914 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms