RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 LENG9Q96B70 501 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 ECT2Q9H8V3 914 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 PARVGQ9HBI0 331 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
TCF4-232ENST00000566286 DNAJC6O75061 913 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 RTN2O75298 545 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 MTA2O94776 668 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 STK10O94804 968 aaKnown RBP11.74□□□□□ -0.53
TCF4-232ENST00000566286 CIITAP33076 1130 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 SHMT1P34896 483 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
TCF4-232ENST00000566286 PEX5P50542 639 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 BNIP1Q12981 228 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 ARHGAP44Q17R89 818 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CBWD6Q4V339 395 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CBWD3Q5JTY5 395 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CBWD5Q5RIA9 395 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CAPN12Q6ZSI9 719 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 C12orf50Q8NA57 414 aaPredicted RBP11.74□□□□□ -0.53
TCF4-232ENST00000566286 AGAP11Q8TF27 550 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 KRT35Q92764 455 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 KLHL29Q96CT2 875 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 EIF2AK1Q9BQI3 630 aaKnown RBP11.74□□□□□ -0.53
TCF4-232ENST00000566286 DMAC2Q9NW81 257 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 VAV3Q9UKW4 847 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
TCF4-232ENST00000566286 TCP11X1B4DZS4 312 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 GJB6O95452 261 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 ECEL1O95672 775 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 ALDH5A1P51649 535 aaPredicted RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 CETN1Q12798 172 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 PALB2Q86YC2 1186 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 SLC13A5Q86YT5 568 aaPredicted RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 UHMK1Q8TAS1 419 aaKnown RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 ARHGEF2Q92974 986 aaKnown RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 CCDC17Q96LX7 622 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 AMNQ9BXJ7 453 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 TUFT1Q9NNX1 390 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
TCF4-232ENST00000566286 DBR1Q9UK59 544 aaKnown RBP11.73□□□□□ -0.53
TCF4-232ENST00000566286 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 FAM86B1E9PN63 330 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 FOXN3O00409 490 aaPredicted RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 IGF2BP3O00425 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
TCF4-232ENST00000566286 MSH4O15457 936 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 FAM86B2P0C5J1 330 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 COMTP21964 271 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 NMT1P30419 496 aaKnown RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 SKIV2L2P42285 1042 aaKnown RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 KCNJ2P63252 427 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 BFSP1Q12934 665 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 ZNF568Q3ZCX4 644 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 ZFYVE27Q5T4F4 411 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 AADACL2Q6P093 401 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SPATA21Q7Z572 469 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SLC9A9Q8IVB4 645 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SLCO2A1Q92959 643 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 TRIM7Q9C029 511 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SPC25Q9HBM1 224 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 RXFP1Q9HBX9 757 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 ARHGEF3Q9NR81 526 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 AGPAT3Q9NRZ7 376 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 FGFR1OP2Q9NVK5 253 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 WHRNQ9P202 907 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 LRRN2O75325 713 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 TRIM49P0CI25 452 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 MARCKSL1P49006 195 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 CYP2J2P51589 502 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SF3A3Q12874 501 aaKnown RBP eCLIP11.72□□□□□ -0.53
TCF4-232ENST00000566286 C1orf186Q6ZWK4 172 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 SP8Q8IXZ3 490 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 CKAP2Q8WWK9 683 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 ANKRD27Q96NW4 1050 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 CDC42EP4Q9H3Q1 356 aaKnown RBP11.72□□□□□ -0.53
TCF4-232ENST00000566286 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
TCF4-232ENST00000566286 L3MBTL1Q9Y468 752 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms