RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 KRT79Q5XKE5 535 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 GPR65Q8IYL9 337 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 LNX1Q8TBB1 728 aaPredicted RBP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 RSAD2Q8WXG1 361 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 ACSF2Q96CM8 615 aaPredicted RBP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 ACO2Q99798 780 aaKnown RBP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 RHOBTB2Q9BYZ6 727 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 NT5C3AQ9H0P0 336 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 PTPRHQ9HD43 1115 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 DNM3Q9UQ16 869 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 TNFSF13BQ9Y275 285 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 PDCD11Q14690 1871 aaKnown RBP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 SFI1A8K8P3 1242 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 LAD1O00515 517 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 SOX4Q06945 474 aaPredicted RBP26.11■■□□□ 1.77
RAB40C-209ENST00000565511 DTHD1Q6ZMT9 781 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 CEP57Q86XR8 500 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 TMEM105Q8N8V8 129 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 C3orf58Q8NDZ4 430 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 PIK3R5Q8WYR1 880 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 PLIN2Q99541 437 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 TTPALQ9BTX7 342 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 TARS2Q9BW92 718 aaKnown RBP26.11■■□□□ 1.77
RAB40C-209ENST00000565511 RAB34Q9BZG1 259 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 KCNK12Q9HB15 430 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 FAM86C1Q9NVL1 165 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 FBXW11Q9UKB1 542 aa26.11■■□□□ 1.77
RAB40C-209ENST00000565511 K7ERI5 159 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 NARSO43776 548 aaKnown RBP26.1■■□□□ 1.77
RAB40C-209ENST00000565511 ST18O60284 1047 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 RAD51AP2Q09MP3 1159 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 ZRSR1Q15695 479 aaKnown RBP26.1■■□□□ 1.77
RAB40C-209ENST00000565511 PSMD5Q16401 504 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 LRRC15Q8TF66 581 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 HDAC7Q8WUI4 952 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 PLEKHA4Q9H4M7 779 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 NOTCH4Q99466 2003 aa26.1■■□□□ 1.77
RAB40C-209ENST00000565511 I3L4J1 428 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 SLC16A4O15374 487 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 CLCNKBP51801 687 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 PTPN5P54829 565 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 OSTNP61366 133 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 ZNF568Q3ZCX4 644 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 HYIQ5T013 277 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 ST13P5Q8NFI4 369 aaPredicted RBP26.09■■□□□ 1.77
RAB40C-209ENST00000565511 STK24Q9Y6E0 443 aa26.09■■□□□ 1.77
RAB40C-209ENST00000565511 ZMYND10O75800 440 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 PROZP22891 400 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 GBP2P32456 591 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 GRM5P41594 1212 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 DMP1Q13316 513 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 RILPL1Q5EBL4 403 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 CWF19L1Q69YN2 538 aaKnown RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 RSPO2Q6UXX9 243 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 TMEM130Q8N3G9 435 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 ZBTB45Q96K62 511 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 ZMAT2Q96NC0 199 aaKnown RBP26.08■■□□□ 1.77
RAB40C-209ENST00000565511 PRKD2Q9BZL6 878 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 TMEM134Q9H6X4 195 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 KMT5AQ9NQR1 393 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 ZDHHC7Q9NXF8 308 aa26.08■■□□□ 1.77
RAB40C-209ENST00000565511 NPHP3-ACAD11A0A0J9YXS1 232 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 SMIM28A0A1B0GU29 152 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 VWA3AA6NCI4 1184 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 C1RP00736 705 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 FGFR3P22607 806 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 TDGQ13569 410 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 TMEM119Q4V9L6 283 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 XKR4Q5GH76 650 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 ALKAL1Q6UXT8 129 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 DUSP12Q9UNI6 340 aa26.07■■□□□ 1.76
RAB40C-209ENST00000565511 TMEM189-UBE2V1I3L0A0 370 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 NPR3P17342 541 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 GUCY2CP25092 1073 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 TKTP29401 623 aaKnown RBP26.06■■□□□ 1.76
RAB40C-209ENST00000565511 BRCC3P46736 316 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 SLC12A3P55017 1021 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 NTHL1P78549 312 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 CACNB1Q02641 598 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-209ENST00000565511 CREMQ03060 361 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 UPP1Q16831 310 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 CYP26C1Q6V0L0 522 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-209ENST00000565511 SNX27Q96L92 541 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 DRC1Q96MC2 740 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 MRPL4Q9BYD3 311 aaKnown RBP26.06■■□□□ 1.76
RAB40C-209ENST00000565511 EPS15L1Q9UBC2 864 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 DPP7Q9UHL4 492 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 KIF3AQ9Y496 699 aa26.06■■□□□ 1.76
RAB40C-209ENST00000565511 B3GAT3O94766 335 aa26.05■■□□□ 1.76
RAB40C-209ENST00000565511 HARSP12081 509 aaKnown RBP26.05■■□□□ 1.76
RAB40C-209ENST00000565511 ELMSAN1Q6PJG2 1045 aa26.05■■□□□ 1.76
RAB40C-209ENST00000565511 GET4Q7L5D6 327 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-209ENST00000565511 DDX27Q96GQ7 796 aaKnown RBP26.05■■□□□ 1.76
RAB40C-209ENST00000565511 TBC1D32Q96NH3 1257 aa26.05■■□□□ 1.76
RAB40C-209ENST00000565511 PIDD1Q9HB75 910 aa26.05■■□□□ 1.76
RAB40C-209ENST00000565511 H3BQV1 296 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 GRIN1Q05586 938 aa26.04■■□□□ 1.76
RAB40C-209ENST00000565511 SEZ6Q53EL9 994 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms