RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KCNJ18B7U540 433 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 OGTO15294 1046 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 HARSP12081 509 aaKnown RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 POU3F3P20264 500 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 MTIF2P46199 727 aaKnown RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 ERVK-21P61565 698 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 KCNJ12Q14500 433 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 HSP90AA4PQ58FG1 418 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 CDKAL1Q5VV42 579 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 EEF1DP3Q658K8 133 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 FAM186BQ8IYM0 893 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 RDH13Q8NBN7 331 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 LINC01599Q8WXQ3 324 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 TGS1Q96RS0 853 aaKnown RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 YME1L1Q96TA2 773 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 TRIM6Q9C030 488 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-208ENST00000564247 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
CMTM3-208ENST00000564247 GOLGA8IPA6NC78 632 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 GOLGA8JA6NMD2 632 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 MAPK13O15264 365 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 KRT13P13646 458 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 ZNF18P17022 549 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 IGFBP4P22692 258 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 CASP4P49662 377 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 PLCB2Q00722 1185 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 TCP11X2Q5H9J9 407 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 TWF2Q6IBS0 349 aaKnown RBP18.43■□□□□ 0.54
CMTM3-208ENST00000564247 SPRED2Q7Z698 418 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 USP37Q86T82 979 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 CDR2LQ86X02 465 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-208ENST00000564247 SAAL1Q96ER3 474 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 CNOT6LQ96LI5 555 aaKnown RBP18.43■□□□□ 0.54
CMTM3-208ENST00000564247 FAM213AQ9BRX8 229 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 CDT1Q9H211 546 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
CMTM3-208ENST00000564247 ARMCX3Q9UH62 379 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-208ENST00000564247 NLRC5Q86WI3 1866 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-208ENST00000564247 FSD2A1L4K1 749 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 RFXAPO00287 272 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 AKAP3O75969 853 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 NPTXRO95502 500 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 SERPINC1P01008 464 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 MRE11P49959 708 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 SNRNP35Q16560 246 aaKnown RBP18.42■□□□□ 0.54
CMTM3-208ENST00000564247 FILIP1LQ4L180 1135 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 INTS8Q75QN2 995 aaKnown RBP18.42■□□□□ 0.54
CMTM3-208ENST00000564247 IRF2BP1Q8IU81 584 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 THNSL1Q8IYQ7 743 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 CRIPAKQ8N1N5 446 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 HSD3B7Q9H2F3 369 aa18.42■□□□□ 0.54
CMTM3-208ENST00000564247 RALGAPA2Q2PPJ7 1873 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 TULP1O00294 542 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 ABLIM1O14639 778 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 CLTAP09496 248 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 ACOT2P49753 483 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 MARSP56192 900 aaKnown RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 HACE1Q8IYU2 909 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 FBXL18Q96ME1 805 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
CMTM3-208ENST00000564247 CCDC94Q9BW85 323 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 RC3H2Q9HBD1 1191 aaKnown RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 LIMA1Q9UHB6 759 aaKnown RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 PRRC2BQ5JSZ5 2229 aaKnown RBP18.41■□□□□ 0.54
CMTM3-208ENST00000564247 LPXNO60711 386 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 STAG3L1P0CL83 205 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 SKIP12755 728 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 ATP1A3P13637 1013 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 PRKCSHP14314 528 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-208ENST00000564247 FANCCQ00597 558 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 POU5F1Q01860 360 aaKnown RBP18.4■□□□□ 0.54
CMTM3-208ENST00000564247 PPP2R3AQ06190 1150 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 SURF1Q15526 300 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 CBWD2Q8IUF1 395 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 NPAS4Q8IUM7 802 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM3-208ENST00000564247 ACAP3Q96P50 834 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 TUBGCP2Q9BSJ2 902 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 RPF1Q9H9Y2 349 aaKnown RBP18.4■□□□□ 0.54
CMTM3-208ENST00000564247 MTCH2Q9Y6C9 303 aa18.4■□□□□ 0.54
CMTM3-208ENST00000564247 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 CBFA2T2O43439 604 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 DGKIO75912 1065 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 TPM3P06753 285 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 GRM5P41594 1212 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 RAB27AP51159 221 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 YARSP54577 528 aaKnown RBP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 OSTNP61366 133 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 KRT31Q15323 416 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 ZSWIM2Q8NEG5 633 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 ZNF689Q96CS4 500 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 MFSD14AQ96MC6 490 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 ADAM2Q99965 735 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 C17orf80Q9BSJ5 609 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms