RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SLC2A13Q96QE2 648 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 SMAD5Q99717 465 aaKnown RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 ZNF747Q9BV97 191 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 ZNF341Q9BYN7 854 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 KCNH6Q9H252 994 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 DMRT3Q9NQL9 472 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 CEP72Q9P209 647 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 POLHQ9Y253 713 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 ANKRD6Q9Y2G4 727 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA9Q9Y5G4 932 aaKnown RBP3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA8Q9Y5G5 932 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA7Q9Y5G6 932 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA6Q9Y5G7 932 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 PCDHGA3Q9Y5H0 932 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 ZMYM3Q14202 1370 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 ATRNL1Q5VV63 1379 aa3.88□□□□□ -1.79
CHD9-207ENST00000562806 RNASET2O00584 256 aaKnown RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 ALDH1L1O75891 902 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 RAP2AP10114 183 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 MTHFD1P11586 935 aaKnown RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 DDCP20711 480 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 TACR2P21452 398 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 CTXN1P60606 82 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 TOB2Q14106 344 aaPredicted RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 UBXN2BQ14CS0 331 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 SEPT2Q15019 361 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 LSM12Q3MHD2 195 aaKnown RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 DACT2Q5SW24 774 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 C1QL3Q5VWW1 255 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 AFMIDQ63HM1 303 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 CRIP3Q6Q6R5 217 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 CPA6Q8N4T0 437 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 AOPEPQ8N6M6 819 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 OR10H5Q8NGA6 315 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 CCHCR1Q8TD31 782 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 SLC25A43Q8WUT9 341 aaPredicted RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 HAS1Q92839 578 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 LENG9Q96B70 501 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 CEP95Q96GE4 821 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 MRI1Q9BV20 369 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 GNL3LQ9NVN8 582 aaKnown RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 TUBD1Q9UJT1 453 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 AJAP1Q9UKB5 411 aaPredicted RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 PNMA8BQ9ULN7 279 aaPredicted RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 SORCS3Q9UPU3 1222 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 ATP11BQ9Y2G3 1177 aa3.87□□□□□ -1.79
CHD9-207ENST00000562806 MYBBP1AQ9BQG0 1328 aaKnown RBP3.87□□□□□ -1.79
CHD9-207ENST00000562806 CYR61O00622 381 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 HTRA2O43464 458 aaPredicted RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 SCAF4O95104 1147 aaKnown RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 CT47B1P0C2W7 299 aaPredicted RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 FTH1P19P0C7X4 201 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 GDF5P43026 501 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 SLC6A9P48067 706 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 KRTAP10-2P60368 255 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 ZXDAP98168 799 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 ABHD18Q0P651 414 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 MTM1Q13496 603 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 UAP1L1Q3KQV9 507 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 GADL1Q6ZQY3 521 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 GDF7Q7Z4P5 450 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 XYLT1Q86Y38 959 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 CMTR2Q8IYT2 770 aaKnown RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 ZNF276Q8N554 614 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 REPS2Q8NFH8 660 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 CPT1CQ8TCG5 803 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 ZNF483Q8TF39 744 aaPredicted RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 HSPBAP1Q96EW2 488 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 FAM167AQ96KS9 214 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 CPEB1Q9BZB8 566 aaKnown RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 AASDHPPTQ9NRN7 309 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 FZD1Q9UP38 647 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 SIK3Q9Y2K2 1263 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 LUC7L2Q9Y383 392 aaKnown RBP3.86□□□□□ -1.79
CHD9-207ENST00000562806 IPPQ9Y573 584 aa3.86□□□□□ -1.79
CHD9-207ENST00000562806 CCDC154A6NI56 674 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 DRGXA6NNA5 263 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 PLSCR1O15162 318 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 IL33O95760 270 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 ANXA1P04083 346 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 ADH4P08319 380 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 C6P13671 934 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 LAG3P18627 525 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 BMPR1AP36894 532 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 IL12RB1P42701 662 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 ATP8B2P98198 1209 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 NHLH2Q02577 135 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 TAP1Q03518 808 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 SPDYE7PQ495Y7 208 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 PABPC1LQ4VXU2 614 aaKnown RBP3.85□□□□□ -1.79
CHD9-207ENST00000562806 LY6G5CQ5SRR4 150 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 ANKS6Q68DC2 871 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 GGNQ86UU5 652 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 RHOT2Q8IXI1 618 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 FAM43AQ8N2R8 423 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 FITM2Q8N6M3 262 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 AMER2Q8N7J2 671 aa3.85□□□□□ -1.79
CHD9-207ENST00000562806 DPF2Q92785 391 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms