RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SLC7A6OSQ96CW6 309 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 ANO3Q9BYT9 981 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 TBC1D7Q9P0N9 293 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 LNPEPQ9UIQ6 1025 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 GMEB1Q9Y692 573 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 BMP3P12645 472 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 PPP1R2P41236 205 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■■□□ 17.7
GTF3C1-203ENST00000562609 LONRF1Q17RB8 773 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 TPCN2Q8NHX9 752 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 CYP2W1Q8TAV3 490 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 DCAF4Q8WV16 495 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 LRRC37BQ96QE4 947 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 ETNK2Q9NVF9 386 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 TMOD2Q9NZR1 351 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 ZNF70Q9UC06 446 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 E9PMD0 336 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 STX2P32856 288 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 CD151P48509 253 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 MTFR1Q15390 333 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 PRR16Q569H4 304 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 CNNM4Q6P4Q7 775 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 SH3TC2Q8TF17 1288 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 CCDC97Q96F63 343 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 C7orf25Q9BPX7 421 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 SLX1AQ9BQ83 275 aa14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 GLIS2Q9BZE0 524 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 ZNF646O15015 1829 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-203ENST00000562609 RBM47A0AV96 593 aaKnown RBP14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 RIPK2O43353 540 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 ENTPD3O75355 529 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 ZNF189O75820 626 aaPredicted RBP14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 TMCC1O94876 653 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 CBX6O95503 412 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 PTENP60484 403 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 ACVR2BQ13705 512 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 DNAJC14Q6Y2X3 702 aaPredicted RBP14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 DDX12PQ92771 950 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 PITPNM3Q9BZ71 974 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 CHKBQ9Y259 395 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 COMMD3-BMI1R4GMX3 469 aa14.96□□□□□ -0.02
GTF3C1-203ENST00000562609 BTNL10A8MVZ5 291 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 POLGP54098 1239 aaPredicted RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 UBXN2AP68543 259 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 MPP2Q14168 576 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 ASIC2Q16515 512 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 SYDE2Q5VT97 1194 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 PPP1R18Q6NYC8 613 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 RFWD3Q6PCD5 774 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 LRRC74BQ6ZQY2 392 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 FBXO11Q86XK2 927 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 HAPLN3Q96S86 360 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 AMNQ9BXJ7 453 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 AIPL1Q9NZN9 384 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 KIAA1024Q9UPX6 916 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 CHMP2BQ9UQN3 213 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 NPHP3-ACAD11A0A0J9YXS1 232 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEB3A0JP26 581 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 POTECB2RU33 542 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 FGFR1OPO95684 399 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 LYNP07948 512 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 T-ENOLP0DO92 83 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 AMPD3Q01432 767 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 GIT2Q14161 759 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 KPNB1Q14974 876 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 ZRSR2Q15696 482 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 MFSD5Q6N075 450 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 POTEBQ6S5H4 581 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 RAB34Q9BZG1 259 aa14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
GTF3C1-203ENST00000562609 CAPN9O14815 690 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 RTP1P59025 263 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 PTK2Q05397 1052 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 LIN52Q52LA3 116 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 JAMLQ86YT9 394 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 RAD54LQ92698 747 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ABCB11O95342 1321 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 MEIS1O00470 390 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 KRT36O76013 467 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 EGFRP00533 1210 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 MARK3P27448 753 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ARHGAP4P98171 946 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 LMNB2Q03252 620 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ARHGAP27Q6ZUM4 889 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 DTX3LQ8TDB6 740 aa14.94□□□□□ -0.02
GTF3C1-203ENST00000562609 ATRNL1Q5VV63 1379 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms