RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 BCAR1P56945 870 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 UBE3AQ05086 875 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 CAMK1Q14012 370 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 ADGRE1Q14246 886 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 MYBPC2Q14324 1141 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 TMEM132AQ24JP5 1023 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 KCNT2Q6UVM3 1135 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 CD302Q8IX05 232 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 ZMAT2Q96NC0 199 aaKnown RBP14.64□□□□□ -0.07
CDH1-204ENST00000562118 CBWD1Q9BRT8 395 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 MSTO1Q9BUK6 570 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 LMAN2LQ9H0V9 348 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 CLSTN2Q9H4D0 955 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 AAASQ9NRG9 546 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 DNAJB4Q9UDY4 337 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 AGO2Q9UKV8 859 aaKnown RBP14.64□□□□□ -0.07
CDH1-204ENST00000562118 TRAF3IP3Q9Y228 551 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
CDH1-204ENST00000562118 VWA8A3KMH1 1905 aa14.64□□□□□ -0.07
CDH1-204ENST00000562118 TMEM189-UBE2V1I3L0A0 370 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 PDXKO00764 312 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 SMC2O95347 1197 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 POMCP01189 267 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 ITGB1P05556 798 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 CXCL8P10145 99 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 SLC11A1P49279 550 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 TUSC3Q13454 348 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 MORC3Q14149 939 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 ZNF658Q5TYW1 1059 aaPredicted RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 FOXR2Q6PJQ5 311 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 TMEM173Q86WV6 379 aaPredicted RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 ZC3H3Q8IXZ2 948 aaKnown RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 THNSL1Q8IYQ7 743 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 KLHL23Q8NBE8 558 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 ZSWIM2Q8NEG5 633 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 GOLGA5Q8TBA6 731 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 SPPL3Q8TCT6 385 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 ARNTL2Q8WYA1 636 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 ZNF558Q96NG5 402 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
CDH1-204ENST00000562118 TCHPQ9BT92 498 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 APOL6Q9BWW8 343 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 KLK14Q9P0G3 267 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 PARP2Q9UGN5 583 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 INPP5FQ9Y2H2 1132 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 GDAQ9Y2T3 454 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 DERAQ9Y315 318 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 TSC2P49815 1807 aa14.63□□□□□ -0.07
CDH1-204ENST00000562118 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 FSCN2O14926 492 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 EXTL3O43909 919 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 THP07101 528 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 CYP3A5P20815 502 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 YARSP54577 528 aaKnown RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 SOX4Q06945 474 aaPredicted RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 BRSK2Q8IWQ3 736 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 GDPD5Q8WTR4 605 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 BCL7CQ8WUZ0 217 aaPredicted RBP14.62□□□□□ -0.07
CDH1-204ENST00000562118 POMGNT1Q8WZA1 660 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 IGSF21Q96ID5 467 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 RPS6KC1Q96S38 1066 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 VN1R3Q9BXE9 311 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 PRDM12Q9H4Q4 367 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 ASB7Q9H672 318 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 HSPBP1Q9NZL4 362 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 KIAA1468Q9P260 1216 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 STK39Q9UEW8 545 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 MAN1B1Q9UKM7 699 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 C2CD2Q9Y426 696 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
CDH1-204ENST00000562118 GRM6O15303 877 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 ZC3H11AO75152 810 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDH1-204ENST00000562118 FGF18O76093 207 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 KIF20AO95235 890 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 IBSPP21815 317 aaPredicted RBP14.61□□□□□ -0.07
CDH1-204ENST00000562118 DNAJB1P25685 340 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 LRPAP1P30533 357 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 ACOT2P49753 483 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 WNT7BP56706 349 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 OSTNP61366 133 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 COL19A1Q14993 1142 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 SEZ6Q53EL9 994 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 CENPPQ6IPU0 288 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 ARMCX5Q6P1M9 558 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 CD300LGQ6UXG3 332 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 NT5DC4Q86YG4 428 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 SYCP3Q8IZU3 236 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 ADSSL1Q8N142 457 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 GPD1LQ8N335 351 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 TRIML1Q8N9V2 468 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 ERCC4Q92889 916 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms