RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CTHP32929 405 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ABCD1P33897 745 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 GTF2F1P35269 517 aaKnown RBP eCLIP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 EIF4A3P38919 411 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 PRKCIP41743 596 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ABL2P42684 1182 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 VAMP7P51809 220 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 POLR2FP61218 127 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 CLDN10P78369 228 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 LAMTOR4Q0VGL1 99 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 DCAF17Q5H9S7 520 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ZNF484Q5JVG2 852 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 IER5Q5VY09 327 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 OLFML2BQ68BL8 750 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 IQSEC1Q6DN90 963 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 IQCEQ6IPM2 695 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 CRELD2Q6UXH1 353 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 C15orf39Q6ZRI6 1047 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 INTS8Q75QN2 995 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 DPP9Q86TI2 863 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ZNF397Q8NF99 534 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 MYRIPQ8NFW9 859 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 CD99L2Q8TCZ2 262 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 PARD3BQ8TEW8 1205 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 AFG1LQ8WV93 481 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 TRAPPC12Q8WVT3 735 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 PRPF31Q8WWY3 499 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 SLC7A3Q8WY07 619 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 GLG1Q92896 1179 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 WDR24Q96S15 920 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 SYT11Q9BT88 431 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 INTS2Q9H0H0 1204 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 NUCKS1Q9H1E3 243 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ABHD16BQ9H3Z7 469 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 AZI2Q9H6S1 392 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 L2HGDHQ9H9P8 463 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 NLRC4Q9NPP4 1024 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 KLHL42Q9P2K6 505 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 COQ4Q9Y3A0 265 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 COL1A2P08123 1366 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 CEP350Q5VT06 3117 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 A0A0B4J269 797 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 GOLGA8IPA6NC78 632 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 GOLGA8JA6NMD2 632 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 LRRIQ3A6PVS8 624 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-210ENST00000561817 GPR25O00155 361 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PJA2O43164 708 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 CA12O43570 354 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 EXTL3O43909 919 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 LRRN2O75325 713 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PPFIA4O75335 1185 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SERPING1P05155 500 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 MMP3P08254 477 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 INSRRP14616 1297 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PROZP22891 400 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 CAP1Q01518 475 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 CYP24A1Q07973 514 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SNRNP35Q16560 246 aaKnown RBP7.09□□□□□ -1.27
CAPN3-210ENST00000561817 CCL14Q16627 93 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PRAMEF19Q5SWL8 479 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 MARCH8Q5T0T0 291 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SFMBT2Q5VUG0 894 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 TCERG1LQ5VWI1 586 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PHLDB3Q6NSJ2 640 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 GJB7Q6PEY0 223 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SYT10Q6XYQ8 523 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 NPAS4Q8IUM7 802 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 LRRC71Q8N4P6 559 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 TCP11Q8WWU5 503 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PSPC1Q8WXF1 523 aaKnown RBP7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SEMA4DQ92854 862 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 ZBTB10Q96DT7 871 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SAAL1Q96ER3 474 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 ZBTB45Q96K62 511 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 LACRTQ9GZZ8 138 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 TMEM117Q9H0C3 514 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 FZD8Q9H461 694 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PTPRHQ9HD43 1115 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 ZNHIT6Q9NWK9 470 aaKnown RBP7.09□□□□□ -1.27
CAPN3-210ENST00000561817 SAGE1Q9NXZ1 904 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 ERAP1Q9NZ08 941 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 GCNT4Q9P109 453 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 DAAM1Q9Y4D1 1078 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 PAXBP1Q9Y5B6 917 aa7.09□□□□□ -1.27
CAPN3-210ENST00000561817 FRMPD3Q5JV73 1810 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 EVPLQ92817 2033 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 CNTNAP2Q9UHC6 1331 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 TLDC2A0PJX2 215 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 LRRIQ4A6NIV6 560 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 HMGB1P1B2RPK0 211 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 K7ERI5 159 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 KIAA0391O15091 583 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 CTIFO43310 598 aaKnown RBP7.08□□□□□ -1.28
CAPN3-210ENST00000561817 FKTNO75072 461 aa7.08□□□□□ -1.28
CAPN3-210ENST00000561817 N4BP1O75113 896 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms