RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 HVCN1Q96D96 273 aa21.76■■□□□ 1.07
TSPAN3-210ENST00000561277 C7orf25Q9BPX7 421 aa21.76■■□□□ 1.07
TSPAN3-210ENST00000561277 PAAF1Q9BRP4 392 aa21.76■■□□□ 1.07
TSPAN3-210ENST00000561277 NGRNQ9NPE2 291 aaKnown RBP21.76■■□□□ 1.07
TSPAN3-210ENST00000561277 ANKRD63C9JTQ0 380 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 KCNA5P22460 613 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 SYKP43405 635 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 SMC1AQ14683 1233 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 NAB2Q15742 525 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 HASPINQ8TF76 798 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 ATXN2LQ8WWM7 1075 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 PABPC5Q96DU9 382 aaKnown RBP21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 COLEC11Q9BWP8 271 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 ZBP1Q9H171 429 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 TLE6Q9H808 572 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 BRWD1Q9NSI6 2320 aa21.75■■□□□ 1.07
TSPAN3-210ENST00000561277 SMIM28A0A1B0GU29 152 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 LINC01565O15544 149 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 CXCL8P10145 99 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 TNFSF9P41273 254 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 MRPS5P82675 430 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 CUL4BQ13620 913 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 ZBTB41Q5SVQ8 909 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 L1TD1Q5T7N2 865 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 GLIS3Q8NEA6 775 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 PPP1R10Q96QC0 940 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 ACCSQ96QU6 501 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 MSTO1Q9BUK6 570 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 STRA6Q9BX79 667 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 GOLPH3LQ9H4A5 285 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 PCDHB13Q9Y5F0 798 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 TRIP11Q15643 1979 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 A0A0B4J269 797 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 A0A1W2PQ27 194 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 A0A1W2PQ64 194 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 A0A1W2PQD8 194 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 MEFVO15553 781 aaPredicted RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 BMS1Q14692 1282 aaKnown RBP21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 CNNM4Q6P4Q7 775 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 ALKAL1Q6UXT8 129 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 GOLGA2P5Q9HBQ8 144 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 CNTN3Q9P232 1028 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 EXOC7Q9UPT5 735 aa21.74■■□□□ 1.07
TSPAN3-210ENST00000561277 CITO14578 2027 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 H3BQ06 376 aaPredicted RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 OGTO15294 1046 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 NCK2O43639 380 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 PRPF6O94906 941 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 CXCL14O95715 111 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 CLTAP09496 248 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 CTSAP10619 480 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 ALCAMQ13740 583 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 HSP90AA2PQ14568 343 aaPredicted RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 SLC10A6Q3KNW5 377 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 XKR4Q5GH76 650 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 UNC13DQ70J99 1090 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 SYCP3Q8IZU3 236 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 MRPL43Q8N983 215 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 PAGE5Q96GU1 130 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 ZMAT2Q96NC0 199 aaKnown RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 ASB2Q96Q27 587 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 ADAM28Q9UKQ2 775 aa21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 CIZ1Q9ULV3 898 aaPredicted RBP21.73■■□□□ 1.07
TSPAN3-210ENST00000561277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 FAM237AA0A1B0GTK4 181 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 C2orf71A6NGG8 1288 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 C2CD2LO14523 706 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 FAM189A1O60320 539 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 TADA2AO75478 443 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 KIF4AO95239 1232 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 NDUFV1P49821 464 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 KCNQ1P51787 676 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 COL19A1Q14993 1142 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 FAM26FQ5R3K3 315 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 EFHBQ8N7U6 833 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 POMGNT1Q8WZA1 660 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 STK39Q9UEW8 545 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 USP25Q9UHP3 1055 aa21.72■■□□□ 1.07
TSPAN3-210ENST00000561277 GOLGA6L4A6NEF3 574 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 SOD2P04179 222 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 SOX4Q06945 474 aaPredicted RBP21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 SPAG1Q07617 926 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 KYAT1Q16773 422 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 DUSP6Q16828 381 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 AAK1Q2M2I8 961 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 CTC1Q2NKJ3 1217 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 SLFN12LQ6IEE8 588 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 FUT10Q6P4F1 479 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 STXBP4Q6ZWJ1 553 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 TAS1R1Q7RTX1 841 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 TMEM87AQ8NBN3 555 aa21.71■■□□□ 1.07
TSPAN3-210ENST00000561277 TBX10O75333 385 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 URODP06132 367 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 KCNE1P15382 129 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 ACOT2P49753 483 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 CLCNKBP51801 687 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 RBM10P98175 930 aaKnown RBP21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 PPP2R3AQ06190 1150 aa21.7■■□□□ 1.06
TSPAN3-210ENST00000561277 DLX2Q07687 328 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms