RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 PRG3Q9Y2Y8 225 aaPredicted RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 SPEGQ15772 3267 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 DENND4CQ5VZ89 1909 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 CCDC163A0A0D9SF12 145 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 F8W810 466 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 M0R2N6 131 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 C8AP07357 584 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 CHRNB1P11230 501 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 FCARP24071 287 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 MLH1P40692 756 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 QARSP47897 775 aaKnown RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 SCNN1GP51170 649 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 LAMTOR4Q0VGL1 99 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 ELAVL2Q12926 359 aaKnown RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 MXD4Q14582 209 aaPredicted RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 NAB2Q15742 525 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 NTRK3Q16288 839 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 PPM1LQ5SGD2 360 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 LIN9Q5TKA1 542 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 TSSK4Q6SA08 328 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 TRMT1LQ7Z2T5 733 aaKnown RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 FERMT3Q86UX7 667 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 RAB11FIP4Q86YS3 637 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 C4orf19Q8IY42 314 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 HACE1Q8IYU2 909 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 CCDC148Q8NFR7 591 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 SLC7A3Q8WY07 619 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 TTPALQ9BTX7 342 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 AGXT2Q9BYV1 514 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 DNMT3BQ9UBC3 853 aaKnown RBP8.3□□□□□ -1.08
APH1B-209ENST00000560716 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 BACE2Q9Y5Z0 518 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 KIAA1549LQ6ZVL6 1849 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 CACNA1GO43497 2377 aa8.3□□□□□ -1.08
APH1B-209ENST00000560716 LAMA1P25391 3075 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 NUP205Q92621 2012 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 TMEM150BA6NC51 233 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 GOLGA8AA7E2F4 631 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 GOLGA8BA8MQT2 603 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 K7ESF4 209 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 ARNTLO00327 626 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 HRO43593 1189 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 CD72P21854 359 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 FGFR3P22607 806 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 EVCP57679 992 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 NTHL1P78549 312 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 DMWDQ09019 674 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 TUSC3Q13454 348 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 HSP90AA2PQ14568 343 aaPredicted RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 PRSS36Q5K4E3 855 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 N4BP2L1Q5TBK1 243 aaPredicted RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 LONP2Q86WA8 852 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 SPEM1Q8N4L4 309 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 IRF7Q92985 503 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 CHAMP1Q96JM3 812 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 FAM20AQ96MK3 541 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 EIF2AQ9BY44 585 aaKnown RBP8.29□□□□□ -1.08
APH1B-209ENST00000560716 LRRC2Q9BYS8 371 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 PLA2G2FQ9BZM2 168 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 KCNMB3Q9NPA1 279 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 HEBP1Q9NRV9 189 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 MTRRQ9UBK8 725 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
APH1B-209ENST00000560716 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 DDX11L8A8MPP1 907 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 TBX3O15119 743 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 ATMINO43313 823 aaPredicted RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 TADA2AO75478 443 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 ERLIN2O94905 339 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 ABLIM3O94929 683 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 LYPLA2O95372 231 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 P4HBP07237 508 aaKnown RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 ZNF806P0C7X5 589 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 ARF4P18085 180 aaPredicted RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 RPL17P18621 184 aaKnown RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 CXCL12P48061 93 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 EPHA5P54756 1037 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 MBTD1Q05BQ5 628 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 NCBP1Q09161 790 aaKnown RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 PTGDRQ13258 359 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 GAS6Q14393 721 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 ACAP1Q15027 740 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 PSMD5Q16401 504 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 FAM187BQ17R55 369 aa8.28□□□□□ -1.08
APH1B-209ENST00000560716 PABPC1LQ4VXU2 614 aaKnown RBP8.28□□□□□ -1.08
APH1B-209ENST00000560716 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms