RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RSPH3Q86UC2 560 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 ARHGEF19Q8IW93 802 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 CGRRF1Q99675 332 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 PI4K2AQ9BTU6 479 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 CRISPLD2Q9H0B8 497 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 TMEM8AQ9HCN3 771 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 PCDH10Q9P2E7 1040 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 KIAA0100Q14667 2235 aaKnown RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 VNN1O95497 513 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 NFICP08651 508 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 UCHL3P15374 230 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 CDK7P50613 346 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 IQCEQ6IPM2 695 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 NOTUMQ6P988 496 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 SLC27A1Q6PCB7 646 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 WDR59Q6PJI9 974 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 CNGA4Q8IV77 575 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 FAM126BQ8IXS8 530 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 FNBP1Q96RU3 617 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 DNAJC7Q99615 494 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 MTMR12Q9C0I1 747 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 ST3GAL5Q9UNP4 418 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 A0A1W2PQJ5 194 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 SOWAHDA6NJG2 315 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 CKBP12277 381 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 CD52P31358 61 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 LPIN1Q14693 890 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 SLC10A6Q3KNW5 377 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 KRT39Q6A163 491 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 PHLDB3Q6NSJ2 640 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 KAT5Q92993 513 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 NUP58Q9BVL2 599 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 PLCB1Q9NQ66 1216 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 SNTG2Q9NY99 539 aa18.76■□□□□ 0.59
CHRNA3-206ENST00000559658 PDCD11Q14690 1871 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 LACTBL1A8MY62 500 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 RPS6KA5O75582 802 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 SGPL1O95470 568 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 C4BPAP04003 597 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 ZBED6P86452 979 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 NFX1Q12986 1120 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 ZACNQ401N2 412 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 PANX2Q96RD6 677 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 CHP1Q99653 195 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 BAG1Q99933 345 aaPredicted RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 APOL6Q9BWW8 343 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 CEP72Q9P209 647 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 MGEA5O60502 916 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 PQBP1O60828 265 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 PLEKP08567 350 aaPredicted RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 TPM1P09493 284 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 EHBP1Q8NDI1 1231 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 ADPGKQ9BRR6 497 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 RPF1Q9H9Y2 349 aaKnown RBP18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 UMODL1Q5DID0 1318 aa18.75■□□□□ 0.59
CHRNA3-206ENST00000559658 MEIS3P2A8K0S8 358 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 N4BP1O75113 896 aaKnown RBP18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 TFRCP02786 760 aaKnown RBP18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 AKAP5P24588 427 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 GRM5P41594 1212 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 GUCY2FP51841 1108 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 RAPGEF1Q13905 1077 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 JADE1Q6IE81 842 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 SPOPLQ6IQ16 392 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 RAD9BQ6WBX8 426 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 GPR88Q9GZN0 384 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 COQ4Q9Y3A0 265 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 SCN5AQ14524 2016 aa18.74■□□□□ 0.59
CHRNA3-206ENST00000559658 HLA-DRAP01903 254 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 CLTAP09496 248 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 FECHP22830 423 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 BIRC3Q13489 604 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 DCAF4L1Q3SXM0 396 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 SMG8Q8ND04 991 aaKnown RBP18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 FBXL13Q8NEE6 735 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 OR8K1Q8NGG5 319 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 ERVK-5Q9HDB9 667 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 APEX2Q9UBZ4 518 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 PADI3Q9ULW8 664 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 PMM2O15305 246 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 P4HA2O15460 535 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 CD4P01730 458 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 GTF2H1P32780 548 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 JAM2P57087 298 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 ENPEPQ07075 957 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 PCBP1Q15365 356 aaKnown RBP eCLIP18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 FAM26DQ5JW98 314 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms