RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PLPP4Q5VZY2 271 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 EPM2AIP1Q7L775 607 aaPredicted RBP20.44■□□□□ 0.86
CASC4-209ENST00000559222 FMR1NBQ8N0W7 255 aaPredicted RBP20.44■□□□□ 0.86
CASC4-209ENST00000559222 ENGASEQ8NFI3 743 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 AUTS2Q8WXX7 1259 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 RSPH1Q8WYR4 309 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 TMEM175Q9BSA9 504 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 TLR9Q9NR96 1032 aa20.44■□□□□ 0.86
CASC4-209ENST00000559222 VWA8A3KMH1 1905 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 PPM1AP35813 382 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 HYAL1Q12794 435 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
CASC4-209ENST00000559222 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 KMT5BQ4FZB7 885 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 XKR4Q5GH76 650 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 APBB1IPQ7Z5R6 666 aaPredicted RBP20.43■□□□□ 0.86
CASC4-209ENST00000559222 C18orf25Q96B23 403 aaPredicted RBP20.43■□□□□ 0.86
CASC4-209ENST00000559222 ACAP3Q96P50 834 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 ACCSQ96QU6 501 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 MSTO1Q9BUK6 570 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 NSUN3Q9H649 340 aaKnown RBP20.43■□□□□ 0.86
CASC4-209ENST00000559222 SLC39A2Q9NP94 309 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 USP25Q9UHP3 1055 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 FAN1Q9Y2M0 1017 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 STYXL1Q9Y6J8 313 aa20.43■□□□□ 0.86
CASC4-209ENST00000559222 SMIM28A0A1B0GU29 152 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 HIDE1A8MVS5 230 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 OGTO15294 1046 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 THP07101 528 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 SCP2P22307 547 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 ACOT2P49753 483 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 ENOX2Q16206 610 aaKnown RBP20.42■□□□□ 0.86
CASC4-209ENST00000559222 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 TAS1R1Q7RTX1 841 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 HASPINQ8TF76 798 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 TMEM169Q96HH4 297 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 TCF25Q9BQ70 676 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 CNTN3Q9P232 1028 aa20.42■□□□□ 0.86
CASC4-209ENST00000559222 LINC01565O15544 149 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 KIF4AO95239 1232 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 YARSP54577 528 aaKnown RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 WNT7BP56706 349 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 RBM10P98175 930 aaKnown RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 UBE3AQ05086 875 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 DPYDQ12882 1025 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 TUSC3Q13454 348 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 SKIV2LQ15477 1246 aaKnown RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 CRELD2Q6UXH1 353 aaPredicted RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 RBM23Q86U06 439 aaKnown RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 NELFCDQ8IXH7 590 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 SCFD1Q8WVM8 642 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 ERCC4Q92889 916 aaPredicted RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 SAAL1Q96ER3 474 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 B3GALT6Q96L58 329 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 ZBP1Q9H171 429 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 TUBGCP4Q9UGJ1 667 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 CPSF3Q9UKF6 684 aaKnown RBP20.41■□□□□ 0.86
CASC4-209ENST00000559222 LZTS1Q9Y250 596 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 PCDHB13Q9Y5F0 798 aa20.41■□□□□ 0.86
CASC4-209ENST00000559222 PVALEFA0A1B0GWK0 134 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 NR1I2O75469 434 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 EFEMP2O95967 443 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 ALDH2P05091 517 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 CLTAP09496 248 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 PLXNA3P51805 1871 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 GUCY2FP51841 1108 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 TFF2Q03403 129 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 STK4Q13043 487 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 DDX53Q86TM3 631 aaKnown RBP20.4■□□□□ 0.86
CASC4-209ENST00000559222 VPS52Q8N1B4 723 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 TMEM87AQ8NBN3 555 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 C3orf58Q8NDZ4 430 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 POMGNT1Q8WZA1 660 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 FAM84AQ96KN4 292 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 IPO9Q96P70 1041 aaKnown RBP20.4■□□□□ 0.86
CASC4-209ENST00000559222 PCIF1Q9H4Z3 704 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 ENTPD7Q9NQZ7 604 aa20.4■□□□□ 0.86
CASC4-209ENST00000559222 TOPORSQ9NS56 1045 aaPredicted RBP20.4■□□□□ 0.86
CASC4-209ENST00000559222 AGO2Q9UKV8 859 aaKnown RBP20.4■□□□□ 0.86
CASC4-209ENST00000559222 TTC26A0AVF1 554 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 GOLGA8IPA6NC78 632 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 GOLGA8JA6NMD2 632 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 LACTBL1A8MY62 500 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 PER2O15055 1255 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 EIF3DO15371 548 aaKnown RBP eCLIP20.39■□□□□ 0.85
CASC4-209ENST00000559222 TGFB1I1O43294 461 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 RPN1P04843 607 aaKnown RBP20.39■□□□□ 0.85
CASC4-209ENST00000559222 KCNE1P15382 129 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 ABCD1P33897 745 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 KRT17Q04695 432 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 FAM160A1Q05DH4 1040 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 PNOCQ13519 176 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 ALCAMQ13740 583 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 RNF168Q8IYW5 571 aaPredicted RBP20.39■□□□□ 0.85
CASC4-209ENST00000559222 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.85
CASC4-209ENST00000559222 ZNF507Q8TCN5 953 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms