RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CLEC16AQ2KHT3 1053 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 SGO2Q562F6 1265 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 RSBN1LQ6PCB5 846 aaPredicted RBP17.75■□□□□ 0.43
SPG11-215ENST00000559193 RHBDF2Q6PJF5 856 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 EXOC3L1Q86VI1 746 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
SPG11-215ENST00000559193 TRIM7Q9C029 511 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CCDC113Q9H0I3 377 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 VEZTQ9HBM0 779 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 TBC1D22BQ9NU19 505 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 RAB20Q9NX57 234 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 WHRNQ9P202 907 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 EXOC7Q9UPT5 735 aa17.75■□□□□ 0.43
SPG11-215ENST00000559193 CCNE2O96020 404 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 HMGB2P26583 209 aaKnown RBP17.74■□□□□ 0.43
SPG11-215ENST00000559193 CHKAP35790 457 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 NPTX2P47972 431 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 GHRHRQ02643 423 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 SNX1Q13596 522 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 LONRF1Q17RB8 773 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 XKR9Q5GH70 373 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 SLC39A4Q6P5W5 647 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 PARP9Q8IXQ6 854 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ANKS4BQ8N8V4 417 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 HERPUD2Q9BSE4 406 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ROPN1BQ9BZX4 212 aaPredicted RBP17.74■□□□□ 0.43
SPG11-215ENST00000559193 ROPN1Q9HAT0 212 aaPredicted RBP17.74■□□□□ 0.43
SPG11-215ENST00000559193 TBC1D12O60347 775 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ATP9AO75110 1047 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
SPG11-215ENST00000559193 PSMC5P62195 406 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 TAX1BP1Q86VP1 789 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ATG4AQ8WYN0 398 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 BSNDQ8WZ55 320 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 CNKSR1Q969H4 720 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ELAC2Q9BQ52 826 aaKnown RBP17.74■□□□□ 0.43
SPG11-215ENST00000559193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPG11-215ENST00000559193 ANAPC7Q9UJX3 599 aa17.74■□□□□ 0.43
SPG11-215ENST00000559193 ACSL3O95573 720 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 CCDC91Q7Z6B0 441 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 FAM228AQ86W67 206 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 FLAD1Q8NFF5 587 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 TMC2Q8TDI7 906 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 FAM84AQ96KN4 292 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 MFSD14AQ96MC6 490 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 TAAR1Q96RJ0 339 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 HOMER2Q9NSB8 354 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 DENND3A2RUS2 1198 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 VIMP08670 466 aaKnown RBP17.73■□□□□ 0.43
SPG11-215ENST00000559193 MAPK4P31152 587 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 SV2AQ7L0J3 742 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 KIFAP3Q92845 792 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 GMLQ99445 158 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 ZNF341Q9BYN7 854 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 ASIC3Q9UHC3 531 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 SLC12A4Q9UP95 1085 aa17.73■□□□□ 0.43
SPG11-215ENST00000559193 PSME4Q14997 1843 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 RAD17O75943 681 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 IVDP26440 423 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 CYP24A1Q07973 514 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 PGM5Q15124 567 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 SNCBQ16143 134 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 OTUD6AQ7L8S5 288 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
SPG11-215ENST00000559193 TPX2Q9ULW0 747 aaKnown RBP17.72■□□□□ 0.43
SPG11-215ENST00000559193 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 KRT5P13647 590 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 DMP1Q13316 513 aaPredicted RBP17.72■□□□□ 0.43
SPG11-215ENST00000559193 PTK6Q13882 451 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 ANO5Q75V66 913 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 SUPT20HQ8NEM7 779 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 PLVAPQ9BX97 442 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
SPG11-215ENST00000559193 WDR64B1ANS9 1081 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 UNGP13051 313 aaPredicted RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 CREB1P16220 341 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 GTF2H1P32780 548 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 SOX10P56693 466 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 GSCP56915 257 aaPredicted RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 SNF8Q96H20 258 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 KMT5AQ9NQR1 393 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 GSTA1P08263 222 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
SPG11-215ENST00000559193 ITIH2P19823 946 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 JAK3P52333 1124 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 LRRC14Q15048 493 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 LLGL2Q6P1M3 1020 aa17.71■□□□□ 0.43
SPG11-215ENST00000559193 VSTM1Q6UX27 236 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms