RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 INPP5FQ9Y2H2 1132 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 GIT1Q9Y2X7 761 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 LTBP2Q14767 1821 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 SCN5AQ14524 2016 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ARL5CA6NH57 179 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 MAPK13O15264 365 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 XPOTO43592 962 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM189A1O60320 539 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 ADRB2P07550 413 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TPM2P07951 284 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 DLATP10515 647 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 FGFR1P11362 822 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 ATP2A2P16615 1042 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TNNI1P19237 187 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 CDK11BP21127 795 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 MTIF2P46199 727 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 SCNN1GP51170 649 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM189BP81408 668 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 POU5F1Q01860 360 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 SPAG1Q07617 926 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 CYP24A1Q07973 514 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 HSP90AA4PQ58FG1 418 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 CRELD2Q6UXH1 353 aaPredicted RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 AGMOQ6ZNB7 445 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 RNF214Q8ND24 703 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 RSPH1Q8WYR4 309 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TOP1MTQ969P6 601 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 CCDC127Q96BQ5 260 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 KIF12Q96FN5 646 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 FBXL18Q96ME1 805 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 YME1L1Q96TA2 773 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 GAD1Q99259 594 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 GDF15Q99988 308 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 MRPL9Q9BYD2 267 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM117Q9H0C3 514 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 ASB7Q9H672 318 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 SAMSN1Q9NSI8 373 aaKnown RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC38A7Q9NVC3 462 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 CXXC1Q9P0U4 656 aaPredicted RBP7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TET1Q8NFU7 2136 aa7.16□□□□□ -1.26
CHRNA3-204ENST00000559002 TTC26A0AVF1 554 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TBKBP1A7MCY6 615 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 MEIS3P2A8K0S8 358 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 LACTBL1A8MY62 500 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 KCNJ18B7U540 433 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 PES1O00541 588 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 STX10O60499 249 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 OFD1O75665 1012 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 CLSTN1O94985 981 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GJB5O95377 273 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TNNC2P02585 160 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM191BP0C7N4 346 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 EEF1GP26641 437 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GATMP50440 423 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 VAMP7P51809 220 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TFAMQ00059 246 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 RNASELQ05823 741 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 BFSP1Q12934 665 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GRIK3Q13003 919 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 KCNJ12Q14500 433 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM132DQ14C87 1099 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 PSMD6Q15008 389 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 IQCB1Q15051 598 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 SHHQ15465 462 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC10A6Q3KNW5 377 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 PAN2Q504Q3 1202 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 NOMO2Q5JPE7 1267 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GLRA4Q5JXX5 417 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 CLLU1OSQ5K130 101 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 C9orf50Q5SZB4 431 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 LMBRD2Q68DH5 695 aaPredicted RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 JADE1Q6IE81 842 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 FRMD5Q7Z6J6 570 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TMCO2Q7Z6W1 182 aaPredicted RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 LUZP1Q86V48 1076 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 GAS2L3Q86XJ1 694 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 NT5DC4Q86YG4 428 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 WDR49Q8IV35 697 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 HERC6Q8IVU3 1022 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 DHX40Q8IX18 779 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 LRRC43Q8N309 656 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 BEST2Q8NFU1 509 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 PHOSPHO2Q8TCD6 241 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TMC2Q8TDI7 906 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 ANKRD36BP1Q96IX9 119 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 MFSD14AQ96MC6 490 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 ZFP42Q96MM3 310 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 TSPAN18Q96SJ8 248 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 CGRRF1Q99675 332 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 MMRN2Q9H8L6 949 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 PDE11AQ9HCR9 933 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 FANCLQ9NW38 375 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 CNTN3Q9P232 1028 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 KANSL3Q9P2N6 904 aa7.15□□□□□ -1.26
CHRNA3-204ENST00000559002 UBQLN1Q9UMX0 589 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms