RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 NR2E1Q9Y466 385 aa6.12□□□□□ -1.43
SMAD3-209ENST00000558894 TCHHQ07283 1943 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ARHGEF35A5YM69 484 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CASTOR2A6NHX0 329 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM189-UBE2V1I3L0A0 370 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 LAD1O00515 517 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 N4BP3O15049 544 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 NARSO43776 548 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ABCB7O75027 752 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 HIP1RO75146 1068 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 URODP06132 367 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ADH1AP07327 375 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 MYBP10242 640 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 FGFR3P22607 806 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CA8P35219 290 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CLCNKBP51801 687 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 PEX3P56589 373 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 GRIN1Q05586 938 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 NCBP1Q09161 790 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 MTMR3Q13615 1198 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 BMS1Q14692 1282 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 RABEP1Q15276 862 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 MAPK6Q16659 721 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 UPP1Q16831 310 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 USP41Q3LFD5 358 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ARSHQ5FYA8 562 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ATF7IP2Q5U623 682 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 HAUS3Q68CZ6 603 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CWF19L1Q69YN2 538 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 PALB2Q86YC2 1186 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ZBTB8OSQ8IWT0 167 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 UBALD2Q8IYN6 164 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM130Q8N3G9 435 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TDRD5Q8NAT2 981 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 FAM184AQ8NB25 1140 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ERMNQ8TAM6 284 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 SNX29Q8TEQ0 813 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 HASPINQ8TF76 798 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 RSAD2Q8WXG1 361 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 RIN2Q8WYP3 895 aaPredicted RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 PIK3R5Q8WYR1 880 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 KIFAP3Q92845 792 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 KCNN1Q92952 543 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 MYADMQ96S97 322 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ACO2Q99798 780 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TRIM6Q9C030 488 aaPredicted RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CDT1Q9H211 546 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM134Q9H6X4 195 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TSHZ2Q9NRE2 1034 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 EPS15L1Q9UBC2 864 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 PARP2Q9UGN5 583 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 FBXW11Q9UKB1 542 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 NOL7Q9UMY1 257 aaKnown RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 TNFSF13BQ9Y275 285 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 SSX2IPQ9Y2D8 614 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 DNAH14Q0VDD8 3507 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 WDR87Q6ZQQ6 2873 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 KIF26AQ9ULI4 1882 aaPredicted RBP6.11□□□□□ -1.43
SMAD3-209ENST00000558894 ZNF292O60281 2723 aa6.11□□□□□ -1.43
SMAD3-209ENST00000558894 CACNA1BQ00975 2339 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 SCN1AP35498 2009 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 CLUHO75153 1309 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PHLPP2Q6ZVD8 1323 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TICRRQ7Z2Z1 1910 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 SMIM28A0A1B0GU29 152 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 SFI1A8K8P3 1242 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 ANHXE9PGG2 379 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 K7ERI5 159 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PI15O43692 258 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 FAM189A1O60320 539 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TBC1D4O60343 1298 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TADA2AO75478 443 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 ZMYND10O75800 440 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GLUD1P00367 558 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 THP07101 528 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GUCY2CP25092 1073 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GJB2P29033 226 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GRM5P41594 1212 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 EFNA5P52803 228 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 SLC12A3P55017 1021 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TDGQ13569 410 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 DCAF4L1Q3SXM0 396 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM119Q4V9L6 283 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 RILPL1Q5EBL4 403 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GLRA4Q5JXX5 417 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 FAM171A1Q5VUB5 890 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 DTHD1Q6ZMT9 781 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 CCDC149Q6ZUS6 474 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 GLYCTKQ8IVS8 523 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 PLCD3Q8N3E9 789 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 SYT2Q8N9I0 419 aaPredicted RBP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TMEM161BQ8NDZ6 487 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 DEPTORQ8TB45 409 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 CCDC43Q96MW1 224 aaKnown RBP6.1□□□□□ -1.43
SMAD3-209ENST00000558894 TBC1D32Q96NH3 1257 aa6.1□□□□□ -1.43
SMAD3-209ENST00000558894 FIZ1Q96SL8 496 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms