RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 SMIM28A0A1B0GU29 152 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 NRP1O14786 923 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 THP07101 528 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 CLTAP09496 248 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 CXCL8P10145 99 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 NAB2Q15742 525 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 NELFCDQ8IXH7 590 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 KIAA0895Q8NCT3 520 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 POMGNT1Q8WZA1 660 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 MRPL38Q96DV4 380 aaKnown RBP13.63□□□□□ -0.23
LRRC28-206ENST00000558471 SNX27Q96L92 541 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
LRRC28-206ENST00000558471 TOPORSQ9NS56 1045 aaPredicted RBP13.63□□□□□ -0.23
LRRC28-206ENST00000558471 CACNG4Q9UBN1 327 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
LRRC28-206ENST00000558471 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
LRRC28-206ENST00000558471 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
LRRC28-206ENST00000558471 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 GARTP22102 1010 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 PPM1AP35813 382 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 OR1G1P47890 313 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 ACOT2P49753 483 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 KRT17Q04695 432 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 TUSC3Q13454 348 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 KCNB1Q14721 858 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 ENOX2Q16206 610 aaKnown RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 KYAT1Q16773 422 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 PTPROQ16827 1216 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 BMT2Q1RMZ1 405 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 CRELD2Q6UXH1 353 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 ELOA2Q8IYF1 753 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 ZSWIM2Q8NEG5 633 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 BCL7CQ8WUZ0 217 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 RABGGTAQ92696 567 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 CCDC47Q96A33 483 aaKnown RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 IGSF21Q96ID5 467 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 PPP1R10Q96QC0 940 aaKnown RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 PAAF1Q9BRP4 392 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 CBWD1Q9BRT8 395 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
LRRC28-206ENST00000558471 CNTN3Q9P232 1028 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 UBE4BO95155 1302 aa13.62□□□□□ -0.23
LRRC28-206ENST00000558471 TTC26A0AVF1 554 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 CARNS1A5YM72 827 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 CASTOR2A6NHX0 329 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 LACTBL1A8MY62 500 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 F8W810 466 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
LRRC28-206ENST00000558471 CSPG5O95196 566 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 KCNE1P15382 129 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 IRS1P35568 1242 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 ERVFC1P60507 584 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 UBE3AQ05086 875 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 SPAG1Q07617 926 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 CCDC85BQ15834 202 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-206ENST00000558471 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
LRRC28-206ENST00000558471 MICALL1Q8N3F8 863 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 MARCH5Q9NX47 278 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
LRRC28-206ENST00000558471 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PRG3Q9Y2Y8 225 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-206ENST00000558471 PCDHA5Q9Y5H7 936 aa13.61□□□□□ -0.23
LRRC28-206ENST00000558471 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 ADRB2P07550 413 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 SOX4Q06945 474 aaPredicted RBP13.6□□□□□ -0.23
LRRC28-206ENST00000558471 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
LRRC28-206ENST00000558471 MAFAQ8NHW3 353 aaPredicted RBP13.6□□□□□ -0.23
LRRC28-206ENST00000558471 SPATA20Q8TB22 786 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 GBP4Q96PP9 640 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 AGPAT3Q9NRZ7 376 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
LRRC28-206ENST00000558471 PCDHGC5Q9Y5F6 944 aa13.6□□□□□ -0.23
LRRC28-206ENST00000558471 CLIC2O15247 247 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 SMC2O95347 1197 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 CLCNKBP51801 687 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 SNRPFP62306 86 aaKnown RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 PPP2R3AQ06190 1150 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms